C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene, 28040
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000098306 Gm28040 10090 + 1:133309823-133329901 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000007433 Gm28040-201 133321875-133329901 protein_coding
  ENSMUST00000094557 Gm28040-202 133309823-133323026 protein_coding
  ENSMUST00000178033 Gm28040-203 133327212-133329722 protein_coding
  ENSMUST00000183489 Gm28040-002 133309827-133329901 nonsense_mediated_decay
  ENSMUST00000184603 Gm28040-001 133309827-133329694 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007433ENSMUST00000094557ENSMUST00000178033ENSMUST00000183489ENSMUST00000184603
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.37
ENSMUST00000094557 0.532±0.09 0.037±0.00 0.439±0.05 0.031±0.01 0.083±0.02 6.511±1.96 0.031±0.00 4.834±1.86 6.330±4.92 0.565±0.26 N/A 0.529±0.28 1.047±0.92 0.164±0.00
ENSMUST00000178033 N/A N/A N/A 0.118±0.10 N/A N/A N/A N/A N/A 0.519±0.11 N/A 1.217±0.67 5.020±0.00 1.272±0.73
ENSMUST00000183489 0.405±0.02 N/A 0.544±0.01 0.044±0.00 N/A 1.251±0.00 N/A 2.810±0.87 1.626±0.72 0.330±0.09 0.053±0.00 0.541±0.62 1.270±0.29 0.157±0.04
ENSMUST00000184603 N/A N/A N/A 0.075±0.00 0.272±0.00 2.037±0.00 0.038±0.00 N/A N/A 0.555±0.02 0.095±0.00 0.606±0.49 1.369±0.77 0.348±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Z CIL_00084Z_0002 VISTA 1:132779893-133380922
CIL_0008W2 CIL_0008W2_0002 VISTA 1:133249313-133850886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005794 IEA Golgi apparatus
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000170498 KISS1 KiSS-1 metastasis-suppressor protein_coding Homo_sapiens

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