C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 28040
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183489 Gm28040-002 ENSMUSG00000098306 10090 + 1:133309827-133329901 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000183489
Transcript ID Adipose Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000183489 0.405±0.02 0.544±0.01 0.044±0.00 1.251±0.00 2.810±0.87 1.626±0.72 0.330±0.09 0.053±0.00 0.541±0.62 1.270±0.29 0.157±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Z CIL_00084Z_0002 VISTA 1:132779893-133380922
CIL_0008W2 CIL_0008W2_0002 VISTA 1:133249313-133850886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367194 KISS1-001 protein_coding Homo_sapiens 2e-29 134

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