C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gasdermin C-like, pseudogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000100127 Gsdmcl-ps 10090 + 15:63914448-63925666 pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000185574 Gsdmcl-ps-002 63914461-63925455 processed_transcript
  ENSMUST00000188344 Gsdmcl-ps-004 63922277-63923197 retained_intron
  ENSMUST00000188367 Gsdmcl-ps-001 63915780-63925666 unitary_pseudogene
  ENSMUST00000191285 Gsdmcl-ps-003 63914448-63917063 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000185574ENSMUST00000188344ENSMUST00000188367ENSMUST00000191285
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000185574 0.038±0.00 0.186±0.00 0.007±0.00 0.051±0.01 0.514±0.00 0.015±0.00 0.029±0.02 0.007±0.00 0.015±0.00 0.042±0.01 N/A 15.695±1.76
ENSMUST00000188344 N/A 0.442±0.00 0.532±0.00 N/A N/A N/A N/A 0.184±0.00 N/A N/A 0.222±0.00 N/A
ENSMUST00000188367 N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000191285 N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D6 CIL_0008D6_0002 VISTA 15:63374092-63976818
CIL_0007U4 CIL_0007U4_0002 VISTA 15:63374837-63976253
CIL_0004ZN CIL_0004ZN_0002 CGP 15:63891264-64060448

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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