C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Short transient receptor potential channel 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000100254 TRPC2 10090 + 7:102083116-102096396 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000124189 TRPC2-008 102083116-102096396 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartKidneyLiverMuscleOvaryENSMUST00000124189
Transcript ID Adipose Adrenal Brain Heart Kidney Liver Muscle Ovary
ENSMUST00000124189 1.699±0.35 0.752±0.18 3.830±0.00 0.646±0.00 1.071±0.00 0.486±0.03 0.895±0.09 2.553±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZS CIL_0002ZS_0002 CGP 7:102065511-102096864

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000012 IEA single strand break repair
GO:0000139 IDA Golgi membrane
GO:0002121 IMP inter-male aggressive behavior
GO:0002124 IMP territorial aggressive behavior
GO:0003684 IEA damaged DNA binding
GO:0005515 IPI protein binding
GO:0005516 IDA calmodulin binding
GO:0005635 IDA nuclear envelope
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006816 IMP calcium ion transport
GO:0007204 IPI positive regulation of cytosolic calcium ion concentration
GO:0007340 IMP acrosome reaction
GO:0008050 IMP female courtship behavior
GO:0010468 IMP regulation of gene expression
GO:0012505 IDA endomembrane system
GO:0015279 IDA store-operated calcium channel activity
GO:0016021 IEA integral component of membrane
GO:0019236 IMP response to pheromone
GO:0019992 IMP diacylglycerol binding
GO:0032590 IMP dendrite membrane
GO:0048047 IMP mating behavior, sex discrimination
GO:0070588 IEA calcium ion transmembrane transport
GO:0070679 IDA inositol 1,4,5 trisphosphate binding
GO:1902436 IGI negative regulation of male mating behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003344 trpc2b transient receptor potential cation channel, subfamily C, member 2b protein_coding Danio_rerio
ENSDARG00000039065 si:dkey-93k4.1 si:dkey-93k4.1 protein_coding Danio_rerio

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