C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002ZS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032263-ENSDARG00000003344 CGP 7955 21:29484787-29528587
GeneTranscriptPositionBiotype
ENSDARG00000003344 (trpc2b)
transient receptor potential cation channel, subfamily C, member 2b 		ENSDART00000050172 (trpc2b-001) 29509402-29528587 protein_coding
ENSDARG00000032263 (zgc:110224)
zgc:110224 		ENSDART00000040443 (zgc:110224-001) 29484787-29505906 protein_coding
CIL_0002ZS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000099481-ENSMUSG00000070425 CGP 10090 7:102065511-102096864
GeneTranscriptPositionBiotype
ENSMUSG00000070425 (Trpc2)
transient receptor potential cation channel, subfamily C, member 2 		ENSMUST00000084843 (Trpc2-001) 102065778-102096334 protein_coding
ENSMUST00000094129 (Trpc2-201) 102065713-102096416 protein_coding
ENSMUST00000123372 (Trpc2-002) 102065713-102096864 nonsense_mediated_decay
ENSMUST00000139104 (Trpc2-004) 102075880-102096326 nonsense_mediated_decay
ENSMUST00000155078 (Trpc2-003) 102075876-102096334 nonsense_mediated_decay
ENSMUSG00000099481 (Xndc1)
Xrcc1 N-terminal domain containing 1 		ENSMUST00000094130 (Xndc1-002) 102065758-102083081 protein_coding
ENSMUST00000106950 (Xndc1-001) 102065511-102083762 protein_coding
ENSMUST00000125197 (Xndc1-005) 102075917-102079266 retained_intron
ENSMUST00000140395 (Xndc1-008) 102081058-102082591 processed_transcript
ENSMUST00000141646 (Xndc1-006) 102065522-102070003 processed_transcript
ENSMUST00000142629 (Xndc1-003) 102078784-102083765 nonsense_mediated_decay
ENSMUST00000143839 (Xndc1-009) 102081061-102082521 retained_intron
ENSMUST00000146450 (Xndc1-007) 102065593-102077880 protein_coding
ENSMUST00000153176 (Xndc1-004) 102065520-102080295 retained_intron
ENSMUSG00000100254 (TRPC2)
Short transient receptor potential channel 2 		ENSMUST00000124189 (TRPC2-008) 102083116-102096396 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZS_0001ENSDARG00000003344ENSDART00000050172ENSDARG00000032263ENSDART00000040443CIL_0002ZS_0002ENSMUSG00000070425ENSMUST00000084843ENSMUST00000094129ENSMUST00000123372ENSMUST00000139104ENSMUST00000155078ENSMUSG00000099481ENSMUST00000094130ENSMUST00000106950ENSMUST00000125197ENSMUST00000140395ENSMUST00000141646ENSMUST00000142629ENSMUST00000143839ENSMUST00000146450ENSMUST00000153176ENSMUSG00000100254ENSMUST00000124189
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZS_0001ENSDARG00000003344ENSDART00000050172ENSDARG00000032263ENSDART00000040443CIL_0002ZS_0002ENSMUSG00000070425ENSMUST00000084843ENSMUST00000094129ENSMUST00000123372ENSMUST00000139104ENSMUSG00000099481ENSMUST00000094130ENSMUST00000106950ENSMUST00000125197ENSMUST00000140395ENSMUST00000142629ENSMUST00000143839ENSMUST00000153176ENSMUSG00000100254ENSMUST00000124189
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003344 ENSDART00000050172 N/A N/A N/A 0.106±0.08 N/A N/A 0.084±0.06 0.143±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000032263 ENSDART00000040443 N/A N/A N/A 0.483±0.41 N/A N/A 0.904±0.66 0.891±0.28 N/A N/A 0.074±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000070425 ENSMUST00000084843 N/A N/A N/A N/A 0.937±0.10 0.743±0.00 0.453±0.00 1.175±0.00 0.141±0.00 N/A N/A 1.859±0.48 N/A N/A
ENSMUST00000094129 N/A N/A N/A N/A N/A 1.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123372 1.448±0.39 0.877±0.23 1.319±0.32 2.451±0.60 1.380±0.54 1.054±0.33 0.725±0.17 0.800±0.26 0.383±0.13 1.384±0.38 0.534±0.00 2.044±0.48 0.627±0.03 2.187±0.10
ENSMUST00000139104 N/A 1.130±0.00 N/A N/A N/A 0.607±0.04 0.515±0.00 0.584±0.13 N/A N/A N/A 1.553±0.12 N/A N/A
ENSMUST00000155078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099481 ENSMUST00000094130 3.889±0.54 2.134±0.35 2.365±0.00 3.223±0.00 2.527±0.23 2.848±0.49 N/A 1.729±0.77 2.120±1.42 1.901±0.00 0.690±0.07 4.032±1.07 1.991±0.80 8.989±4.21
ENSMUST00000106950 3.147±0.81 1.796±0.47 1.696±0.00 3.629±0.92 2.430±0.84 1.947±0.45 1.273±0.10 2.593±0.76 1.287±0.81 2.311±0.30 N/A 2.198±0.50 1.063±0.07 3.099±0.00
ENSMUST00000125197 N/A 7.119±0.99 N/A N/A 7.557±0.89 N/A 3.375±0.00 N/A 2.247±0.00 N/A N/A 12.004±2.08 N/A N/A
ENSMUST00000140395 N/A 7.534±1.92 N/A N/A N/A 5.769±0.00 2.629±0.00 3.523±0.00 N/A N/A N/A 9.698±3.51 N/A N/A
ENSMUST00000141646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142629 N/A N/A 4.049±0.36 3.622±0.00 N/A N/A N/A N/A 3.510±0.85 N/A 0.861±0.18 4.921±0.48 2.326±0.79 2.690±0.00
ENSMUST00000143839 N/A 8.102±1.99 N/A N/A 6.350±1.07 N/A N/A N/A 1.180±0.04 4.186±0.00 N/A 7.220±0.00 N/A N/A
ENSMUST00000146450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153176 2.090±0.00 N/A 2.845±0.00 4.258±1.55 2.845±0.86 N/A 1.042±0.23 N/A 2.894±0.88 2.398±0.37 0.866±0.25 3.033±0.95 2.204±0.53 4.053±2.01
ENSMUSG00000100254 ENSMUST00000124189 1.699±0.35 0.752±0.18 N/A 3.830±0.00 N/A N/A 0.646±0.00 1.071±0.00 0.486±0.03 N/A 0.895±0.09 2.553±0.56 N/A N/A

Loading