C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000014_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060937-ENSDARG00000031876 CGP 7955 16:27612995-27632980
GeneTranscriptPositionBiotype
ENSDARG00000031876 (pard6ga)
par-6 partitioning defective 6 homolog gamma A (C. elegans) 		ENSDART00000149445 (pard6ga-001) 27627784-27632980 protein_coding
ENSDARG00000060937 (adnp2a)
ADNP homeobox 2a 		ENSDART00000086375 (adnp2a-001) 27612995-27620184 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000014_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101544-ENSG00000178184 CGP 9606 18:80109031-80247546
GeneTranscriptPositionBiotype
ENSG00000101544 (ADNP2)
ADNP homeobox 2 		ENST00000262198 (ADNP2-001) 80109031-80140351 protein_coding
ENST00000559951 (ADNP2-002) 80109726-80135927 protein_coding
ENST00000560561 (ADNP2-004) 80117608-80136010 protein_coding
ENST00000560752 (ADNP2-003) 80109293-80136166 protein_coding
ENST00000561195 (ADNP2-005) 80117616-80147523 protein_coding
ENSG00000178184 (PARD6G)
par-6 family cell polarity regulator gamma 		ENST00000353265 (PARD6G-001) 80157232-80247546 protein_coding
ENST00000463384 (PARD6G-002) 80182856-80202881 protein_coding
ENST00000470488 (PARD6G-003) 80182850-80247348 protein_coding
ENSG00000267251 (AC139100.3)
 ENST00000588950 (AC139100.3-001) 80183680-80202992 antisense
ENST00000615495 (AC139100.3-002) 80183724-80184961 antisense
ENSG00000267270 (PARD6G-AS1)
PARD6G antisense RNA 1 		ENST00000585422 (PARD6G-AS1-003) 80148049-80169137 antisense
ENST00000586421 (PARD6G-AS1-001) 80147925-80171733 antisense
ENST00000587254 (PARD6G-AS1-002) 80147924-80169182 antisense
ENST00000588226 (PARD6G-AS1-004) 80148049-80149273 antisense
ENST00000589574 (PARD6G-AS1-005) 80148011-80178432 antisense
ENSG00000278000 (AC139100.4)
 ENST00000616901 (AC139100.4-001) 80161752-80162413 sense_intronic

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000014_0001ENSDARG00000031876ENSDART00000149445ENSDARG00000060937ENSDART00000086375CIL_000014_0002ENSG00000101544ENST00000262198ENST00000559951ENST00000560561ENST00000560752ENST00000561195ENSG00000178184ENST00000353265ENST00000463384ENST00000470488ENSG00000267251ENST00000588950ENST00000615495ENSG00000267270ENST00000585422ENST00000586421ENST00000587254ENST00000588226ENST00000589574ENSG00000278000ENST00000616901
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000014_0001ENSDARG00000031876ENSDART00000149445ENSDARG00000060937ENSDART00000086375CIL_000014_0002ENSG00000101544ENST00000262198ENST00000560752ENSG00000178184ENST00000353265ENSG00000267251ENST00000588950ENSG00000267270ENST00000585422ENST00000586421ENST00000587254ENST00000588226ENST00000589574ENSG00000278000ENST00000616901
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031876 ENSDART00000149445 N/A N/A N/A 7.800±0.00 N/A N/A 0.053±0.01 0.043±0.00 N/A N/A 0.204±0.00 N/A N/A N/A
ENSDARG00000060937 ENSDART00000086375 N/A N/A N/A 3.671±1.42 N/A N/A 2.659±0.93 5.817±1.72 0.551±0.00 N/A 0.690±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101544 ENST00000262198 2.830±0.00 5.773±0.00 N/A 2.310±0.03 1.000±0.32 0.789±0.09 0.602±0.40 1.490±0.22 0.856±0.00 1.269±0.62 0.262±0.06 3.032±2.06 1.864±0.88 6.428±3.14
ENST00000559951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560752 N/A N/A 1.087±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178184 ENST00000353265 1.278±0.00 6.287±0.00 0.869±0.00 0.434±0.23 1.013±0.71 1.590±0.76 0.392±0.21 2.072±1.47 0.964±0.16 1.410±0.20 0.266±0.00 1.900±1.08 3.068±0.88 1.460±0.53
ENST00000463384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267251 ENST00000588950 N/A N/A N/A 0.400±0.00 N/A N/A 0.162±0.00 N/A N/A N/A 0.158±0.00 N/A N/A 0.726±0.00
ENST00000615495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267270 ENST00000585422 N/A N/A N/A N/A N/A N/A N/A N/A 0.692±0.00 N/A N/A N/A N/A N/A
ENST00000586421 N/A N/A 0.118±0.00 N/A 0.017±0.00 0.108±0.00 0.008±0.00 N/A 0.111±0.00 N/A N/A 0.081±0.01 0.022±0.01 N/A
ENST00000587254 N/A N/A N/A N/A 0.290±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588226 0.337±0.00 0.184±0.00 0.656±0.00 0.474±0.31 0.294±0.05 0.654±0.26 0.149±0.00 0.537±0.05 0.463±0.10 2.771±0.00 N/A 0.586±0.33 0.384±0.06 3.402±1.46
ENST00000589574 N/A N/A 0.787±0.00 0.431±0.00 0.218±0.00 N/A 0.118±0.00 0.581±0.21 N/A 0.743±0.00 N/A 0.563±0.12 N/A 0.711±0.00
ENSG00000278000 ENST00000616901 N/A 0.089±0.00 N/A 1.098±0.37 0.356±0.00 0.083±0.00 0.106±0.00 0.757±0.27 0.444±0.18 0.159±0.05 N/A 0.523±0.38 0.162±0.09 0.158±0.03

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