C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137463-ENSG00000109390 CGP 9606 4:139266163-139302551
GeneTranscriptPositionBiotype
ENSG00000109390 (NDUFC1)
NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 		ENST00000394223 (NDUFC1-004) 139290031-139302479 protein_coding
ENST00000394225 (NDUFC1-005) 139289953-139302526 processed_transcript
ENST00000394228 (NDUFC1-001) 139289917-139302551 protein_coding
ENST00000503453 (NDUFC1-009) 139289953-139301420 processed_transcript
ENST00000503997 (NDUFC1-002) 139266880-139295815 nonsense_mediated_decay
ENST00000505036 (NDUFC1-003) 139289938-139301204 protein_coding
ENST00000507764 (NDUFC1-007) 139295732-139301210 processed_transcript
ENST00000513022 (NDUFC1-006) 139295118-139301233 processed_transcript
ENST00000539002 (NDUFC1-201) 139289917-139301210 protein_coding
ENST00000539387 (NDUFC1-202) 139289917-139302551 protein_coding
ENST00000544855 (NDUFC1-203) 139289917-139301210 protein_coding
ENSG00000137463 (MGARP)
mitochondria-localized glutamic acid-rich protein 		ENST00000398955 (MGARP-001) 139266163-139280338 protein_coding
ENSG00000164134 (NAA15)
N(alpha)-acetyltransferase 15, NatA auxiliary subunit 		ENST00000296543 (NAA15-001) 139301455-139391382 protein_coding
ENST00000398947 (NAA15-002) 139301588-139391368 protein_coding
ENST00000468029 (NAA15-005) 139351535-139359857 processed_transcript
ENST00000480277 (NAA15-010) 139336873-139351613 processed_transcript
ENST00000482087 (NAA15-004) 139301984-139341073 processed_transcript
ENST00000485905 (NAA15-007) 139384836-139386547 retained_intron
ENST00000496716 (NAA15-006) 139376377-139379335 retained_intron
ENST00000515576 (NAA15-003) 139386168-139420033 protein_coding
CIL_00001V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037161-ENSMUSG00000037152 CGP 10090 3:51388415-51408988
GeneTranscriptPositionBiotype
ENSMUSG00000037152 (Ndufc1)
NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 		ENSMUST00000038108 (Ndufc1-001) 51404677-51408988 protein_coding
ENSMUST00000135602 (Ndufc1-002) 51405472-51408664 processed_transcript
ENSMUST00000145572 (Ndufc1-003) 51405480-51407477 processed_transcript
ENSMUSG00000037161 (Mgarp)
mitochondria localized glutamic acid rich protein 		ENSMUST00000038154 (Mgarp-001) 51388415-51396548 protein_coding
ENSMUST00000108046 (Mgarp-002) 51388415-51396502 protein_coding
ENSMUST00000141156 (Mgarp-003) 51388772-51396738 protein_coding
ENSMUST00000145938 (Mgarp-005) 51391261-51396488 processed_transcript
ENSMUST00000157054 (Mgarp-004) 51390820-51396503 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001V_0001ENSG00000109390ENST00000394223ENST00000394225ENST00000394228ENST00000503453ENST00000503997ENST00000505036ENST00000507764ENST00000513022ENST00000539002ENST00000539387ENST00000544855ENSG00000137463ENST00000398955ENSG00000164134ENST00000296543ENST00000398947ENST00000468029ENST00000480277ENST00000482087ENST00000485905ENST00000496716ENST00000515576CIL_00001V_0002ENSMUSG00000037152ENSMUST00000038108ENSMUST00000135602ENSMUST00000145572ENSMUSG00000037161ENSMUST00000038154ENSMUST00000108046ENSMUST00000141156ENSMUST00000145938ENSMUST00000157054
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001V_0001ENSG00000109390ENST00000394223ENST00000394225ENST00000503453ENST00000505036ENST00000507764ENST00000539002ENST00000539387ENSG00000137463ENST00000398955ENSG00000164134ENST00000296543ENST00000398947ENST00000480277CIL_00001V_0002ENSMUSG00000037152ENSMUST00000038108ENSMUST00000135602ENSMUST00000145572ENSMUSG00000037161ENSMUST00000038154ENSMUST00000108046ENSMUST00000141156ENSMUST00000145938ENSMUST00000157054
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109390 ENST00000394223 N/A N/A 3.900±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 62.853±0.00 41.401±0.00 112.458±0.00
ENST00000394225 4.363±0.00 4.439±0.00 N/A 8.120±0.00 N/A 2.856±0.00 2.717±0.00 N/A N/A N/A N/A 24.593±0.00 N/A N/A
ENST00000394228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503453 11.717±0.00 18.271±0.00 N/A 23.723±0.00 14.355±0.00 16.192±13.46 81.468±0.00 28.648±23.21 37.269±0.00 26.643±0.00 23.781±16.53 38.592±8.09 23.957±3.90 41.281±0.00
ENST00000503997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505036 N/A N/A N/A 1.913±0.00 1.742±0.87 N/A 1.739±0.00 N/A N/A 4.701±0.00 9.681±0.00 N/A N/A 23.909±0.00
ENST00000507764 1.740±0.00 N/A N/A 7.548±0.00 3.062±0.00 6.336±0.00 N/A 8.781±0.00 N/A N/A N/A 1.519±0.00 N/A N/A
ENST00000513022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539002 N/A N/A 1.543±0.00 2.643±0.00 0.675±0.00 0.711±0.00 10.842±4.78 2.697±0.00 1.538±0.00 1.657±0.00 3.537±0.52 N/A N/A N/A
ENST00000539387 N/A N/A N/A N/A N/A N/A N/A N/A 2.893±0.00 N/A N/A N/A 13.774±3.86 N/A
ENST00000544855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137463 ENST00000398955 N/A N/A N/A N/A N/A N/A N/A N/A 0.848±0.00 N/A N/A 16.786±11.61 N/A 7.188±0.00
ENSG00000164134 ENST00000296543 3.081±0.00 2.890±0.00 N/A 2.799±0.00 3.365±0.30 4.417±0.00 1.809±0.00 N/A 2.174±0.49 2.783±0.83 1.420±0.00 5.372±1.31 2.325±1.33 7.971±0.96
ENST00000398947 1.064±0.00 N/A 1.013±0.00 1.618±0.00 1.308±0.41 3.159±0.00 1.833±0.00 2.839±1.40 N/A 1.396±0.50 4.448±0.00 3.319±0.00 1.592±0.73 2.678±0.00
ENST00000468029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480277 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.920±0.00 N/A N/A N/A N/A
ENST00000482087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037152 ENSMUST00000038108 5.987±2.90 80.526±55.37 5.195±0.00 18.365±0.75 14.303±9.59 34.697±4.47 48.099±20.85 36.492±14.67 20.627±10.13 14.655±4.29 17.850±8.45 18.836±12.97 8.744±4.10 30.999±0.67
ENSMUST00000135602 17.928±5.29 195.554±36.26 31.352±0.26 19.504±8.23 13.191±5.75 N/A 53.053±13.37 15.095±0.00 24.138±8.34 6.066±0.00 127.559±14.51 27.985±8.07 25.362±10.48 32.933±14.24
ENSMUST00000145572 N/A N/A N/A 40.289±0.00 N/A N/A N/A N/A N/A N/A N/A 45.689±6.22 25.580±7.10 N/A
ENSMUSG00000037161 ENSMUST00000038154 0.205±0.04 209.962±33.77 1.162±0.26 0.380±0.12 0.206±0.12 0.727±0.35 N/A 0.236±0.14 0.292±0.23 N/A 0.112±0.07 118.679±40.04 0.632±0.15 6.612±0.80
ENSMUST00000108046 N/A N/A 0.111±0.00 0.049±0.00 N/A N/A 0.099±0.03 N/A 0.162±0.02 N/A 0.095±0.00 N/A 0.349±0.28 1.388±0.00
ENSMUST00000141156 0.169±0.00 108.834±7.56 0.541±0.00 0.284±0.06 0.197±0.05 0.215±0.00 0.134±0.04 0.244±0.11 0.152±0.00 0.080±0.02 0.105±0.00 153.611±134.10 1.147±1.24 9.107±5.33
ENSMUST00000145938 N/A 198.916±35.18 N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A
ENSMUST00000157054 N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A

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