C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109390 NDUFC1 9606 - 4:139266880-139302551 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000394223 NDUFC1-004 139290031-139302479 protein_coding
  ENST00000394225 NDUFC1-005 139289953-139302526 processed_transcript
  ENST00000394228 NDUFC1-001 139289917-139302551 protein_coding
  ENST00000503453 NDUFC1-009 139289953-139301420 processed_transcript
  ENST00000503997 NDUFC1-002 139266880-139295815 nonsense_mediated_decay
  ENST00000505036 NDUFC1-003 139289938-139301204 protein_coding
  ENST00000507764 NDUFC1-007 139295732-139301210 processed_transcript
  ENST00000513022 NDUFC1-006 139295118-139301233 processed_transcript
  ENST00000539002 NDUFC1-201 139289917-139301210 protein_coding
  ENST00000539387 NDUFC1-202 139289917-139302551 protein_coding
  ENST00000544855 NDUFC1-203 139289917-139301210 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394223ENST00000394225ENST00000503453ENST00000505036ENST00000507764ENST00000539002ENST00000539387
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394223 N/A N/A 3.900±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 62.853±0.00 41.401±0.00 112.458±0.00
ENST00000394225 4.363±0.00 4.439±0.00 N/A 8.120±0.00 N/A 2.856±0.00 2.717±0.00 N/A N/A N/A N/A 24.593±0.00 N/A N/A
ENST00000503453 11.717±0.00 18.271±0.00 N/A 23.723±0.00 14.355±0.00 16.192±13.46 81.468±0.00 28.648±23.21 37.269±0.00 26.643±0.00 23.781±16.53 38.592±8.09 23.957±3.90 41.281±0.00
ENST00000505036 N/A N/A N/A 1.913±0.00 1.742±0.87 N/A 1.739±0.00 N/A N/A 4.701±0.00 9.681±0.00 N/A N/A 23.909±0.00
ENST00000507764 1.740±0.00 N/A N/A 7.548±0.00 3.062±0.00 6.336±0.00 N/A 8.781±0.00 N/A N/A N/A 1.519±0.00 N/A N/A
ENST00000539002 N/A N/A 1.543±0.00 2.643±0.00 0.675±0.00 0.711±0.00 10.842±4.78 2.697±0.00 1.538±0.00 1.657±0.00 3.537±0.52 N/A N/A N/A
ENST00000539387 N/A N/A N/A N/A N/A N/A N/A N/A 2.893±0.00 N/A N/A N/A 13.774±3.86 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001P CIL_00001P_0001 CGP 4:139028112-139280338
CIL_00001V CIL_00001V_0001 CGP 4:139266163-139302551
CIL_00001U CIL_00001U_0001 CGP 4:139266880-139420033

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005747 NAS mitochondrial respiratory chain complex I
GO:0006120 NAS mitochondrial electron transport, NADH to ubiquinone
GO:0008137 NAS NADH dehydrogenase (ubiquinone) activity
GO:0016021 IEA integral component of membrane
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000037152 Ndufc1 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 protein_coding Mus_musculus

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