C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000DJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205835-ENSG00000188729 CGP 9606 3:190852877-191265615
GeneTranscriptPositionBiotype
ENSG00000188729 (OSTN)
osteocrin 		ENST00000339051 (OSTN-001) 191212533-191250121 protein_coding
ENST00000445281 (OSTN-002) 191199241-191265615 protein_coding
ENSG00000205835 (GMNC)
geminin coiled-coil domain containing 		ENST00000442080 (GMNC-001) 190852878-190862615 protein_coding
ENST00000456552 (GMNC-002) 190857790-190862676 nonsense_mediated_decay
ENST00000479491 (GMNC-004) 190855644-190892429 processed_transcript
ENST00000495042 (GMNC-003) 190852877-190858060 retained_intron
ENSG00000233308 (OSTN-AS1)
OSTN antisense RNA 1 		ENST00000430375 (OSTN-AS1-001) 191213291-191234605 antisense
CIL_0000DJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068428-ENSMUSG00000052276 CGP 10090 16:26957236-27351212
GeneTranscriptPositionBiotype
ENSMUSG00000052276 (Ostn)
osteocrin 		ENSMUST00000066852 (Ostn-001) 27307489-27351212 protein_coding
ENSMUSG00000068428 (Gmnc)
geminin coiled-coil domain containing 		ENSMUST00000089832 (Gmnc-201) 26957236-26989974 protein_coding
ENSMUSG00000089705 (Gm15970)
predicted gene 15970 		ENSMUST00000160623 (Gm15970-001) 27343111-27343944 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DJ_0001ENSG00000188729ENST00000339051ENST00000445281ENSG00000205835ENST00000442080ENST00000456552ENST00000479491ENST00000495042ENSG00000233308ENST00000430375CIL_0000DJ_0002ENSMUSG00000052276ENSMUST00000066852ENSMUSG00000068428ENSMUST00000089832ENSMUSG00000089705ENSMUST00000160623
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DJ_0001ENSG00000188729ENST00000339051ENST00000445281ENSG00000205835ENST00000442080ENST00000456552ENST00000479491ENST00000495042ENSG00000233308ENST00000430375CIL_0000DJ_0002ENSMUSG00000052276ENSMUST00000066852ENSMUSG00000068428ENSMUST00000089832ENSMUSG00000089705ENSMUST00000160623
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000188729 ENST00000339051 N/A N/A 0.557±0.00 N/A 0.028±0.00 N/A N/A 0.289±0.00 N/A N/A N/A N/A 0.051±0.00 N/A
ENST00000445281 N/A 0.020±0.00 0.072±0.00 0.347±0.12 0.007±0.00 0.015±0.00 0.050±0.02 0.102±0.00 0.014±0.00 0.042±0.00 0.062±0.00 0.016±0.01 0.020±0.01 0.037±0.01
ENSG00000205835 ENST00000442080 0.001±0.00 N/A N/A 0.085±0.06 N/A N/A 0.079±0.00 1.249±0.00 0.562±0.00 N/A N/A 0.032±0.00 N/A 0.321±0.06
ENST00000456552 N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A 0.355±0.00
ENST00000479491 N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A 0.640±0.00
ENST00000495042 0.008±0.00 N/A N/A 0.043±0.00 N/A N/A 0.053±0.00 N/A N/A N/A N/A 0.044±0.00 0.032±0.01 N/A
ENSG00000233308 ENST00000430375 0.058±0.00 0.930±0.00 N/A N/A 0.090±0.00 0.249±0.00 0.188±0.00 0.236±0.00 0.436±0.00 0.419±0.00 N/A 0.094±0.00 N/A 0.430±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052276 ENSMUST00000066852 0.039±0.00 N/A 0.012±0.00 0.049±0.05 0.112±0.03 N/A 0.035±0.01 0.032±0.00 0.009±0.00 0.047±0.00 9.412±2.86 0.176±0.11 0.008±0.01 0.112±0.06
ENSMUSG00000068428 ENSMUST00000089832 0.025±0.01 0.037±0.00 0.013±0.01 0.063±0.00 0.028±0.01 0.038±0.00 0.053±0.03 0.019±0.01 0.006±0.00 1.016±0.00 0.010±0.00 0.429±0.28 0.003±0.00 0.066±0.03
ENSMUSG00000089705 ENSMUST00000160623 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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