C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: geminin coiled-coil domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089832 Gmnc-201 ENSMUSG00000068428 10090 - 16:26957236-26989974 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089832
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089832 0.025±0.01 0.037±0.00 0.013±0.01 0.063±0.00 0.028±0.01 0.038±0.00 0.053±0.03 0.019±0.01 0.006±0.00 1.016±0.00 0.010±0.00 0.429±0.28 0.003±0.00 0.066±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DM CIL_0000DM_0002 CGP 16:26581704-26989974
CIL_0000DJ CIL_0000DJ_0002 CGP 16:26957236-27351212

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003682 ISS chromatin binding
GO:0005575 ND cellular_component
GO:0005634 ISS nucleus
GO:0006260 IMP DNA replication
GO:0006270 IEA DNA replication initiation
GO:0007049 IEA cell cycle
GO:0008283 IMP cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000442080 GMNC-001 protein_coding Homo_sapiens 0 963
ENST00000456552 GMNC-002 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000479491 GMNC-004 processed_transcript Homo_sapiens 0 468
ENST00000495042 GMNC-003 retained_intron Homo_sapiens 0 643

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