C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000IH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213551-ENSG00000182180 CGP 9606 10:73183362-73252693
GeneTranscriptPositionBiotype
ENSG00000138286 (FAM149B1)
family with sequence similarity 149, member B1 		ENST00000242505 (FAM149B1-001) 73168166-73244504 protein_coding
ENST00000372955 (FAM149B1-003) 73177872-73235452 protein_coding
ENST00000445951 (FAM149B1-002) 73208692-73242180 protein_coding
ENST00000466261 (FAM149B1-005) 73230296-73235309 retained_intron
ENST00000468462 (FAM149B1-004) 73234108-73242181 retained_intron
ENST00000470798 (FAM149B1-007) 73228107-73235481 processed_transcript
ENST00000475829 (FAM149B1-006) 73210267-73235452 nonsense_mediated_decay
ENST00000607940 (FAM149B1-009) 73230473-73231306 processed_transcript
ENSG00000199201 (Y_RNA)
Y RNA 		ENST00000362331 (Y_RNA.1-203) 73192223-73192325 misc_RNA
ENSG00000213551 (DNAJC9)
DnaJ (Hsp40) homolog, subfamily C, member 9 		ENST00000372950 (DNAJC9-001) 73242824-73248862 protein_coding
ENST00000453189 (DNAJC9-004) 73238770-73243398 processed_transcript
ENST00000469143 (DNAJC9-002) 73183362-73245981 processed_transcript
ENST00000512551 (DNAJC9-003) 73247342-73248268 processed_transcript
ENSG00000227382 (EIF4A2P2)
eukaryotic translation initiation factor 4A2 pseudogene 2 		ENST00000455776 (EIF4A2P2-001) 73199826-73201225 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0000IH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021811-ENSMUSG00000049960 CGP 10090 14:20384638-20393555
GeneTranscriptPositionBiotype
ENSMUSG00000021811 (Dnajc9)
DnaJ (Hsp40) homolog, subfamily C, member 9 		ENSMUST00000022345 (Dnajc9-201) 20384638-20388910 protein_coding
ENSMUSG00000049960 (Mrps16)
mitochondrial ribosomal protein S16 		ENSMUST00000061444 (Mrps16-201) 20391231-20393555 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IH_0001ENSG00000138286ENST00000242505ENST00000372955ENST00000445951ENST00000466261ENST00000468462ENST00000470798ENST00000475829ENST00000607940ENSG00000199201ENST00000362331ENSG00000213551ENST00000372950ENST00000453189ENST00000469143ENST00000512551ENSG00000227382ENST00000455776CIL_0000IH_0002ENSMUSG00000021811ENSMUST00000022345ENSMUSG00000049960ENSMUST00000061444
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IH_0001ENSG00000138286ENST00000242505ENST00000445951ENST00000468462ENSG00000199201ENST00000362331ENSG00000213551ENST00000372950ENSG00000227382ENST00000455776CIL_0000IH_0002ENSMUSG00000021811ENSMUST00000022345ENSMUSG00000049960ENSMUST00000061444
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138286 ENST00000242505 N/A N/A N/A 2.394±0.00 1.759±0.00 1.340±0.27 N/A N/A 1.872±0.00 N/A N/A 2.508±0.97 3.328±0.00 N/A
ENST00000372955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445951 N/A N/A N/A N/A N/A 3.510±0.00 N/A 5.723±1.75 4.168±0.00 7.878±0.00 N/A N/A 7.711±0.00 10.224±0.00
ENST00000466261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468462 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.169±0.00 N/A N/A N/A N/A
ENST00000470798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199201 ENST00000362331 N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213551 ENST00000372950 N/A 9.106±0.00 N/A 6.375±0.23 N/A 2.664±0.00 1.674±0.00 6.786±0.00 N/A N/A N/A 9.135±1.84 5.097±0.00 15.087±5.96
ENST00000453189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227382 ENST00000455776 N/A 0.214±0.00 0.095±0.00 0.062±0.00 0.136±0.00 0.159±0.11 0.019±0.00 0.040±0.00 0.458±0.00 0.504±0.47 0.063±0.00 0.160±0.06 0.080±0.01 0.047±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021811 ENSMUST00000022345 4.414±2.85 24.035±14.97 9.923±0.99 33.140±15.73 10.229±9.95 18.031±2.30 2.666±0.24 5.256±2.95 28.233±29.25 14.388±6.42 7.001±0.32 27.710±13.88 17.248±8.01 55.124±23.09
ENSMUSG00000049960 ENSMUST00000061444 81.129±3.20 123.587±8.94 46.219±10.08 26.885±15.41 75.222±18.18 73.456±10.29 79.865±10.51 100.118±9.10 60.802±9.70 39.888±5.43 54.484±4.40 60.231±15.65 33.015±22.65 11.612±6.11

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