C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061444 Mrps16-201 ENSMUSG00000049960 10090 - 14:20391231-20393555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061444
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061444 81.129±3.20 123.587±8.94 46.219±10.08 26.885±15.41 75.222±18.18 73.456±10.29 79.865±10.51 100.118±9.10 60.802±9.70 39.888±5.43 54.484±4.40 60.231±15.65 33.015±22.65 11.612±6.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IH CIL_0000IH_0002 CGP 14:20384638-20393555
CIL_0000II CIL_0000II_0002 CGP 14:20391231-20452226

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005763 IEA mitochondrial small ribosomal subunit
GO:0006412 IEA translation
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372940 MRPS16-005 protein_coding Homo_sapiens 0 335
ENST00000372945 MRPS16-001 protein_coding Homo_sapiens 0 429
ENST00000471251 MRPS16-003 processed_transcript Homo_sapiens 0 407
ENST00000473427 MRPS16-004 processed_transcript Homo_sapiens 0 407
ENST00000479005 MRPS16-002 processed_transcript Homo_sapiens 0 407

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