C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000QB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170396-ENSG00000188738 CGP 9606 2:184598366-185833290
GeneTranscriptPositionBiotype
ENSG00000170396 (ZNF804A)
zinc finger protein 804A 		ENST00000302277 (ZNF804A-001) 184598366-184939492 protein_coding
ENST00000613975 (ZNF804A-201) 184866365-184939489 protein_coding
ENSG00000188738 (FSIP2)
fibrous sheath interacting protein 2 		ENST00000343098 (FSIP2-201) 185738628-185833289 protein_coding
ENST00000415915 (FSIP2-004) 185794618-185833289 nonsense_mediated_decay
ENST00000424728 (FSIP2-001) 185738895-185833290 protein_coding
ENST00000429412 (FSIP2-003) 185745540-185766549 nonsense_mediated_decay
ENST00000465275 (FSIP2-007) 185739286-185743294 processed_transcript
ENST00000469367 (FSIP2-008) 185743183-185745067 retained_intron
ENST00000611759 (FSIP2-202) 185806082-185833289 protein_coding
ENSG00000225406 (AC080125.1)
 ENST00000414888 (AC080125.1-001) 185547135-185547818 processed_pseudogene
ENSG00000226747 (AC007966.1)
 ENST00000421998 (AC007966.1-001) 185719874-185738721 antisense
ENST00000427269 (AC007966.1-002) 185720212-185740479 antisense
ENST00000437717 (AC007966.1-003) 185736062-185739025 antisense
CIL_0000QB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070866-ENSMUSG00000075249 CGP 10090 2:82053222-83008937
GeneTranscriptPositionBiotype
ENSMUSG00000070866 (Zfp804a)
zinc finger protein 804A 		ENSMUST00000047527 (Zfp804a-001) 82053222-82259879 protein_coding
ENSMUST00000127187 (Zfp804a-002) 82235173-82256880 processed_transcript
ENSMUSG00000075249 (Fsip2)
fibrous sheath-interacting protein 2 		ENSMUST00000132967 (Fsip2-003) 82980796-83008937 nonsense_mediated_decay
ENSMUST00000136202 (Fsip2-002) 82949500-82965490 nonsense_mediated_decay
ENSMUST00000143764 (Fsip2-001) 82943634-83008937 protein_coding
ENSMUSG00000080979 (Gm13675)
predicted gene 13675 		ENSMUST00000120616 (Gm13675-001) 82507216-82507744 unprocessed_pseudogene
ENSMUSG00000082666 (Gm13677)
predicted gene 13677 		ENSMUST00000120739 (Gm13677-001) 82122517-82123111 processed_pseudogene
ENSMUSG00000083804 (Gm13676)
predicted gene 13676 		ENSMUST00000122185 (Gm13676-001) 82543932-82544522 processed_pseudogene
ENSMUSG00000087061 (A130030D18Rik)
RIKEN cDNA A130030D18 gene 		ENSMUST00000128608 (A130030D18Rik-001) 82375372-82392202 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QB_0001ENSG00000170396ENST00000302277ENST00000613975ENSG00000188738ENST00000343098ENST00000415915ENST00000424728ENST00000429412ENST00000465275ENST00000469367ENST00000611759ENSG00000225406ENST00000414888ENSG00000226747ENST00000421998ENST00000427269ENST00000437717CIL_0000QB_0002ENSMUSG00000070866ENSMUST00000047527ENSMUST00000127187ENSMUSG00000075249ENSMUST00000132967ENSMUST00000136202ENSMUST00000143764ENSMUSG00000080979ENSMUST00000120616ENSMUSG00000082666ENSMUST00000120739ENSMUSG00000083804ENSMUST00000122185ENSMUSG00000087061ENSMUST00000128608
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QB_0001ENSG00000170396ENST00000302277ENST00000613975ENSG00000188738ENST00000343098ENST00000415915ENST00000424728ENST00000429412ENST00000611759ENSG00000225406ENST00000414888ENSG00000226747ENST00000421998CIL_0000QB_0002ENSMUSG00000070866ENSMUST00000047527ENSMUST00000127187ENSMUSG00000075249ENSMUST00000132967ENSMUST00000143764ENSMUSG00000080979ENSMUST00000120616ENSMUSG00000082666ENSMUST00000120739ENSMUSG00000083804ENSMUST00000122185ENSMUSG00000087061ENSMUST00000128608
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170396 ENST00000302277 N/A 0.057±0.00 N/A 0.648±0.26 0.078±0.04 0.093±0.01 0.018±0.00 0.269±0.00 0.037±0.03 0.065±0.00 N/A 0.050±0.02 0.075±0.05 0.094±0.01
ENST00000613975 0.007±0.00 0.059±0.00 0.116±0.00 0.747±0.00 N/A N/A N/A 0.148±0.00 N/A 0.121±0.00 N/A 0.238±0.00 N/A 0.151±0.00
ENSG00000188738 ENST00000343098 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A 0.870±0.22
ENST00000415915 N/A N/A N/A N/A N/A 0.053±0.00 N/A 0.100±0.00 N/A N/A N/A N/A 0.028±0.00 N/A
ENST00000424728 N/A 0.018±0.00 0.346±0.00 0.102±0.08 0.185±0.17 0.026±0.00 0.059±0.04 0.050±0.01 0.350±0.00 0.129±0.12 0.010±0.00 0.132±0.15 0.016±0.00 1.185±0.66
ENST00000429412 0.143±0.00 0.308±0.00 1.088±0.00 0.504±0.24 0.931±0.78 0.862±0.71 0.652±0.44 0.678±0.46 0.916±0.85 0.797±0.77 0.267±0.19 0.717±0.60 0.207±0.16 N/A
ENST00000465275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611759 N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A 15.682±7.92
ENSG00000225406 ENST00000414888 N/A N/A N/A N/A 0.298±0.00 N/A N/A N/A N/A 0.171±0.00 N/A 0.026±0.00 N/A N/A
ENSG00000226747 ENST00000421998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A
ENST00000427269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000070866 ENSMUST00000047527 0.454±0.01 0.126±0.02 0.009±0.01 4.618±1.69 0.010±0.00 0.169±0.04 0.013±0.00 0.023±0.01 0.014±0.01 N/A 0.009±0.00 0.160±0.06 0.022±0.01 0.006±0.00
ENSMUST00000127187 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 0.002±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000075249 ENSMUST00000132967 0.018±0.00 N/A N/A 0.001±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A
ENSMUST00000136202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143764 N/A N/A 0.001±0.00 0.001±0.00 N/A N/A 0.004±0.00 0.002±0.00 0.002±0.00 N/A N/A 0.006±0.00 0.001±0.00 5.101±0.44
ENSMUSG00000080979 ENSMUST00000120616 N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A 0.013±0.00 N/A 0.139±0.00 N/A N/A N/A
ENSMUSG00000082666 ENSMUST00000120739 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A 0.074±0.00 0.020±0.01 N/A
ENSMUSG00000083804 ENSMUST00000122185 N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.164±0.00 0.146±0.00
ENSMUSG00000087061 ENSMUST00000128608 N/A N/A N/A 0.046±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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