C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000QQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099624-ENSG00000167470 CGP 9606 19:1241746-1259140
GeneTranscriptPositionBiotype
ENSG00000099624 (ATP5D)
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit 		ENST00000215375 (ATP5D-001) 1241750-1244826 protein_coding
ENST00000395633 (ATP5D-008) 1241746-1244825 protein_coding
ENST00000588538 (ATP5D-003) 1241817-1244825 retained_intron
ENST00000589478 (ATP5D-005) 1244057-1244825 retained_intron
ENST00000590265 (ATP5D-002) 1241770-1244825 retained_intron
ENST00000591249 (ATP5D-009) 1242505-1244825 protein_coding
ENST00000591660 (ATP5D-006) 1241820-1244786 protein_coding
ENST00000592624 (ATP5D-004) 1241768-1243354 retained_intron
ENST00000614837 (ATP5D-007) 1244058-1244825 retained_intron
ENSG00000167470 (MIDN)
midnolin 		ENST00000300952 (MIDN-201) 1248553-1259140 protein_coding
ENST00000586757 (MIDN-002) 1248553-1254430 protein_coding
ENST00000586843 (MIDN-004) 1251562-1254302 protein_coding
ENST00000590136 (MIDN-005) 1253684-1254303 retained_intron
ENST00000591302 (MIDN-003) 1251261-1254237 retained_intron
ENST00000591446 (MIDN-001) 1249888-1258699 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0000QQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003072-ENSMUSG00000035621 CGP 10090 10:80138632-80158368
GeneTranscriptPositionBiotype
ENSMUSG00000003072 (Atp5d)
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit 		ENSMUST00000003156 (Atp5d-201) 80142315-80145818 protein_coding
ENSMUST00000105366 (Atp5d-003) 80142370-80145812 protein_coding
ENSMUST00000105367 (Atp5d-002) 80141457-80145813 protein_coding
ENSMUST00000150347 (Atp5d-001) 80138632-80142400 processed_transcript
ENSMUSG00000035621 (Midn)
midnolin 		ENSMUST00000042057 (Midn-001) 80148272-80158368 protein_coding
ENSMUST00000099492 (Midn-002) 80148272-80158367 protein_coding
ENSMUST00000124179 (Midn-003) 80149886-80153687 processed_transcript
ENSMUST00000144526 (Midn-004) 80151238-80153696 protein_coding
ENSMUST00000146516 (Midn-005) 80151154-80154472 protein_coding
ENSMUST00000151202 (Midn-007) 80149112-80150278 protein_coding
ENSMUST00000153477 (Midn-006) 80150457-80153868 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QQ_0001ENSG00000099624ENST00000215375ENST00000395633ENST00000588538ENST00000589478ENST00000590265ENST00000591249ENST00000591660ENST00000592624ENST00000614837ENSG00000167470ENST00000300952ENST00000586757ENST00000586843ENST00000590136ENST00000591302ENST00000591446CIL_0000QQ_0002ENSMUSG00000003072ENSMUST00000003156ENSMUST00000105366ENSMUST00000105367ENSMUST00000150347ENSMUSG00000035621ENSMUST00000042057ENSMUST00000099492ENSMUST00000124179ENSMUST00000144526ENSMUST00000146516ENSMUST00000151202ENSMUST00000153477
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QQ_0001ENSG00000099624ENST00000215375ENST00000395633ENST00000589478ENST00000591249ENST00000591660ENST00000614837ENSG00000167470ENST00000300952ENST00000590136ENST00000591302ENST00000591446CIL_0000QQ_0002ENSMUSG00000003072ENSMUST00000003156ENSMUST00000105366ENSMUSG00000035621ENSMUST00000042057ENSMUST00000099492ENSMUST00000146516
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099624 ENST00000215375 40.404±0.00 40.701±0.00 N/A 22.467±0.00 28.124±27.81 32.498±31.45 59.466±0.00 52.997±0.00 21.184±0.00 35.496±0.00 66.163±0.00 31.226±4.15 38.413±4.05 32.036±0.00
ENST00000395633 N/A N/A 1.619±0.00 14.210±4.46 1.587±0.00 2.507±0.00 64.177±59.60 27.862±23.48 55.718±53.49 56.329±0.00 83.418±54.05 26.303±6.95 64.327±27.25 12.903±0.00
ENST00000588538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589478 N/A N/A N/A 4.449±0.00 N/A 20.400±0.00 N/A 1.947±0.00 N/A 0.511±0.00 8.559±0.00 54.248±0.00 N/A 23.692±0.00
ENST00000590265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591249 N/A N/A N/A N/A 22.042±0.00 N/A N/A N/A N/A N/A 17.071±0.00 N/A N/A N/A
ENST00000591660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.520±0.00 42.293±0.00 32.679±0.00
ENST00000592624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614837 39.042±0.00 59.891±0.00 1.861±0.00 28.821±19.31 27.899±26.01 31.300±21.25 N/A 33.604±14.89 2.599±0.00 2.296±0.00 37.506±0.00 26.633±17.31 30.205±6.10 21.086±3.85
ENSG00000167470 ENST00000300952 22.686±0.00 15.274±0.00 N/A 22.933±0.00 9.301±8.61 14.489±0.00 14.010±0.00 14.311±13.44 13.071±0.00 40.248±0.00 12.910±11.07 29.480±30.05 11.121±2.02 8.152±5.28
ENST00000586757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590136 N/A N/A N/A 1.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591302 N/A N/A 1.513±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591446 N/A N/A 1.643±0.00 0.472±0.00 N/A 1.636±0.00 2.264±1.92 N/A 0.625±0.00 11.261±11.00 10.534±0.00 21.204±8.10 7.887±1.97 7.741±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003072 ENSMUST00000003156 387.401±76.38 666.326±130.48 216.080±9.34 265.468±28.87 659.558±302.35 974.630±126.83 679.691±232.84 936.324±117.97 439.683±210.63 362.706±45.39 280.823±21.02 607.936±272.17 228.438±47.08 133.889±22.88
ENSMUST00000105366 N/A 1600.642±176.56 N/A N/A 352.679±50.01 403.617±160.06 N/A N/A N/A N/A N/A 722.777±98.76 N/A N/A
ENSMUST00000105367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035621 ENSMUST00000042057 4.618±1.94 6.814±0.25 2.952±0.17 9.236±0.15 8.178±2.31 17.412±5.57 5.048±1.04 5.102±0.47 2.186±0.69 9.736±2.65 1.612±0.60 17.668±2.43 7.400±2.70 12.481±6.56
ENSMUST00000099492 13.999±7.88 17.189±3.93 9.344±0.76 52.141±34.19 19.456±4.44 27.850±6.70 17.115±4.73 19.379±1.05 7.777±2.42 31.885±9.02 4.760±0.65 22.629±8.13 15.647±8.75 12.109±5.56
ENSMUST00000124179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146516 N/A 27.562±3.98 N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.276±0.00 N/A N/A
ENSMUST00000151202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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