C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000UE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074676-ENSDARG00000075385 CGP 7955 16:1225187-1263364
GeneTranscriptPositionBiotype
ENSDARG00000074676 (rprd2b)
regulation of nuclear pre-mRNA domain containing 2b 		ENSDART00000112345 (rprd2b-201) 1225187-1237821 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000UE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163125-ENSG00000143374 CGP 9606 1:150363091-150507609
GeneTranscriptPositionBiotype
ENSG00000143374 (TARS2)
threonyl-tRNA synthetase 2, mitochondrial (putative) 		ENST00000369051 (TARS2-012) 150487435-150507598 nonsense_mediated_decay
ENST00000369053 (TARS2-002) 150487431-150489308 retained_intron
ENST00000369054 (TARS2-010) 150487414-150507258 protein_coding
ENST00000369064 (TARS2-001) 150487417-150507602 protein_coding
ENST00000438568 (TARS2-201) 150487364-150507609 protein_coding
ENST00000460794 (TARS2-003) 150491990-150497597 retained_intron
ENST00000462578 (TARS2-004) 150492185-150497587 retained_intron
ENST00000463555 (TARS2-006) 150491589-150504436 processed_transcript
ENST00000466989 (TARS2-007) 150487991-150491718 retained_intron
ENST00000467982 (TARS2-008) 150487870-150507183 nonsense_mediated_decay
ENST00000479372 (TARS2-011) 150487442-150488632 retained_intron
ENST00000480070 (TARS2-005) 150491458-150504436 processed_transcript
ENST00000483046 (TARS2-009) 150504333-150506935 processed_transcript
ENST00000606933 (TARS2-013) 150487420-150507284 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UE_0001ENSDARG00000074676ENSDART00000112345CIL_0000UE_0002ENSG00000143374ENST00000369051ENST00000369053ENST00000369054ENST00000369064ENST00000438568ENST00000460794ENST00000462578ENST00000463555ENST00000466989ENST00000467982ENST00000479372ENST00000480070ENST00000483046ENST00000606933
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UE_0001ENSDARG00000074676ENSDART00000112345CIL_0000UE_0002ENSG00000143374ENST00000369051ENST00000369053ENST00000369054ENST00000369064ENST00000467982ENST00000480070ENST00000483046ENST00000606933
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000074676 ENSDART00000112345 N/A N/A N/A 5.985±0.59 N/A N/A 1.174±0.87 2.717±0.48 0.175±0.00 N/A 1.044±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143374 ENST00000369051 N/A N/A N/A N/A N/A N/A N/A N/A 2.573±0.00 1.333±0.00 N/A 7.440±0.00 7.032±0.00 4.482±2.29
ENST00000369053 N/A N/A N/A N/A 3.551±0.00 N/A N/A N/A N/A N/A N/A 1.951±0.00 N/A N/A
ENST00000369054 N/A N/A N/A 3.272±0.00 N/A 1.350±0.00 N/A 3.143±0.00 N/A N/A 1.858±0.41 4.762±3.27 N/A 6.890±0.00
ENST00000369064 0.841±0.00 N/A 0.530±0.00 3.319±0.76 1.911±0.71 0.879±0.36 3.720±0.00 3.451±2.19 2.888±1.98 1.292±0.58 2.253±0.13 3.471±2.03 6.634±0.59 6.255±0.60
ENST00000438568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.334±0.00 N/A N/A N/A
ENST00000479372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480070 N/A N/A N/A N/A N/A 1.385±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483046 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.335±0.00 N/A N/A N/A N/A
ENST00000606933 2.632±0.00 2.723±0.00 1.029±0.00 1.791±0.89 2.109±0.00 0.657±0.00 2.029±1.31 2.342±0.00 0.606±0.00 N/A 3.726±0.00 3.533±0.00 3.348±1.07 N/A

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