C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000VW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160959-ENSG00000254402 CGP 9606 8:144517992-144527032
GeneTranscriptPositionBiotype
ENSG00000160959 (LRRC14)
leucine rich repeat containing 14 		ENST00000292524 (LRRC14-001) 144518007-144525178 protein_coding
ENST00000525766 (LRRC14-005) 144518745-144520387 protein_coding
ENST00000527730 (LRRC14-003) 144517992-144520811 protein_coding
ENST00000528528 (LRRC14-008) 144522582-144524446 processed_transcript
ENST00000529022 (LRRC14-002) 144518005-144522024 protein_coding
ENST00000529995 (LRRC14-009) 144523663-144524871 processed_transcript
ENST00000530242 (LRRC14-007) 144523272-144524291 processed_transcript
ENST00000530854 (LRRC14-004) 144518371-144519985 protein_coding
ENST00000531310 (LRRC14-006) 144519267-144520822 retained_intron
ENSG00000213563 (C8orf82)
chromosome 8 open reading frame 82 		ENST00000313465 (C8orf82-002) 144526219-144529092 protein_coding
ENST00000524821 (C8orf82-001) 144525733-144529132 protein_coding
ENST00000527462 (C8orf82-004) 144528373-144529062 protein_coding
ENST00000532827 (C8orf82-005) 144527324-144528556 protein_coding
ENST00000534680 (C8orf82-003) 144526252-144529132 nonsense_mediated_decay
ENSG00000254402 (LRRC24)
leucine rich repeat containing 24 		ENST00000529415 (LRRC24-001) 144522377-144527018 protein_coding
ENST00000533758 (LRRC24-002) 144522439-144527032 protein_coding
CIL_0000VW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033728-ENSMUSG00000033707 CGP 10090 15:76710623-76723845
GeneTranscriptPositionBiotype
ENSMUSG00000033707 (Lrrc24)
leucine rich repeat containing 24 		ENSMUST00000036247 (Lrrc24-201) 76721466-76723845 protein_coding
ENSMUST00000049956 (Lrrc24-001) 76715276-76722173 protein_coding
ENSMUST00000146725 (Lrrc24-002) 76719628-76722159 retained_intron
ENSMUST00000146855 (Lrrc24-003) 76716207-76718416 retained_intron
ENSMUSG00000033728 (Lrrc14)
leucine rich repeat containing 14 		ENSMUST00000036423 (Lrrc14-002) 76710639-76715035 protein_coding
ENSMUST00000127208 (Lrrc14-001) 76710638-76717699 protein_coding
ENSMUST00000136840 (Lrrc14-008) 76710623-76713570 protein_coding
ENSMUST00000137649 (Lrrc14-004) 76710643-76715084 protein_coding
ENSMUST00000138132 (Lrrc14-010) 76710673-76714749 processed_transcript
ENSMUST00000142506 (Lrrc14-006) 76710673-76716648 retained_intron
ENSMUST00000142610 (Lrrc14-005) 76710643-76715052 nonsense_mediated_decay
ENSMUST00000154531 (Lrrc14-007) 76710663-76715130 retained_intron
ENSMUST00000155225 (Lrrc14-009) 76710649-76712923 protein_coding
ENSMUST00000155735 (Lrrc14-003) 76710731-76715091 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VW_0001ENSG00000160959ENST00000292524ENST00000525766ENST00000527730ENST00000528528ENST00000529022ENST00000529995ENST00000530242ENST00000530854ENST00000531310ENSG00000213563ENST00000313465ENST00000524821ENST00000527462ENST00000532827ENST00000534680ENSG00000254402ENST00000529415ENST00000533758CIL_0000VW_0002ENSMUSG00000033707ENSMUST00000036247ENSMUST00000049956ENSMUST00000146725ENSMUST00000146855ENSMUSG00000033728ENSMUST00000036423ENSMUST00000127208ENSMUST00000136840ENSMUST00000137649ENSMUST00000138132ENSMUST00000142506ENSMUST00000142610ENSMUST00000154531ENSMUST00000155225ENSMUST00000155735
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VW_0001ENSG00000160959ENST00000292524ENST00000528528ENST00000529022ENST00000530854ENSG00000213563ENST00000313465ENST00000524821ENST00000534680ENSG00000254402ENST00000529415ENST00000533758CIL_0000VW_0002ENSMUSG00000033707ENSMUST00000036247ENSMUST00000049956ENSMUSG00000033728ENSMUST00000036423ENSMUST00000127208ENSMUST00000137649ENSMUST00000142610ENSMUST00000154531ENSMUST00000155225ENSMUST00000155735
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160959 ENST00000292524 1.616±0.00 3.796±0.00 N/A 4.183±3.70 2.924±0.00 1.687±0.00 2.793±0.00 2.949±0.00 N/A N/A N/A 5.475±1.43 2.047±0.67 4.279±0.70
ENST00000525766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.288±0.00
ENST00000529022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.049±0.00 N/A 2.556±0.46 N/A
ENST00000529995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.545±0.00 N/A N/A N/A
ENST00000531310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213563 ENST00000313465 9.526±0.00 9.317±0.00 1.534±0.00 N/A 13.333±0.00 7.277±0.00 5.027±4.17 8.213±3.65 18.536±0.00 3.557±2.67 6.248±0.00 11.512±0.00 4.238±0.14 13.826±0.00
ENST00000524821 N/A N/A N/A 1.142±0.00 2.772±0.00 1.678±0.79 N/A 1.594±0.00 0.642±0.00 N/A 1.298±0.00 N/A N/A N/A
ENST00000527462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534680 9.012±0.00 10.932±0.00 N/A N/A 9.786±0.00 6.085±0.00 17.897±0.00 13.205±7.08 14.985±11.85 13.974±0.00 7.692±4.49 19.091±12.49 10.359±2.14 13.041±0.00
ENSG00000254402 ENST00000529415 N/A N/A N/A 1.313±0.00 N/A N/A N/A N/A N/A 1.287±0.00 N/A N/A 4.563±0.00 N/A
ENST00000533758 N/A 8.657±0.00 N/A N/A N/A N/A N/A N/A N/A 8.030±0.00 N/A 6.620±4.63 N/A 11.526±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033707 ENSMUST00000036247 31.727±6.86 93.381±23.40 22.290±2.44 8.459±4.15 41.155±13.69 9.955±1.53 29.969±5.98 31.704±4.42 18.013±6.54 16.004±1.56 21.908±2.53 23.259±9.35 3.030±0.14 3.554±0.12
ENSMUST00000049956 N/A N/A N/A 14.222±5.49 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.973±1.74
ENSMUST00000146725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033728 ENSMUST00000036423 7.271±1.10 N/A 5.850±0.41 2.635±0.00 7.124±0.00 3.461±0.33 N/A 5.111±0.30 3.946±1.35 4.629±0.97 N/A 7.946±3.48 3.967±1.20 3.309±0.34
ENSMUST00000127208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.496±0.00 0.674±0.39
ENSMUST00000136840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137649 N/A N/A N/A 2.378±0.18 N/A 2.179±0.09 N/A N/A 2.271±0.04 3.063±0.00 N/A 4.644±2.27 2.377±0.66 2.246±0.26
ENSMUST00000138132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142610 N/A N/A N/A 3.902±0.67 6.489±0.00 3.499±0.30 N/A N/A 3.162±0.00 4.609±0.15 4.525±0.00 8.555±2.28 3.089±0.84 3.143±0.43
ENSMUST00000154531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.377±0.80 0.612±0.00
ENSMUST00000155225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.096±0.00
ENSMUST00000155735 N/A N/A N/A N/A N/A 3.385±0.00 N/A N/A N/A N/A N/A 4.878±2.21 3.158±1.13 1.108±0.00

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