C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 14
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033728 Lrrc14 10090 + 15:76710623-76717699 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036423 Lrrc14-002 76710639-76715035 protein_coding
  ENSMUST00000127208 Lrrc14-001 76710638-76717699 protein_coding
  ENSMUST00000136840 Lrrc14-008 76710623-76713570 protein_coding
  ENSMUST00000137649 Lrrc14-004 76710643-76715084 protein_coding
  ENSMUST00000138132 Lrrc14-010 76710673-76714749 processed_transcript
  ENSMUST00000142506 Lrrc14-006 76710673-76716648 retained_intron
  ENSMUST00000142610 Lrrc14-005 76710643-76715052 nonsense_mediated_decay
  ENSMUST00000154531 Lrrc14-007 76710663-76715130 retained_intron
  ENSMUST00000155225 Lrrc14-009 76710649-76712923 protein_coding
  ENSMUST00000155735 Lrrc14-003 76710731-76715091 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036423ENSMUST00000127208ENSMUST00000137649ENSMUST00000142610ENSMUST00000154531ENSMUST00000155225ENSMUST00000155735
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036423 7.271±1.10 5.850±0.41 2.635±0.00 7.124±0.00 3.461±0.33 5.111±0.30 3.946±1.35 4.629±0.97 N/A 7.946±3.48 3.967±1.20 3.309±0.34
ENSMUST00000127208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.496±0.00 0.674±0.39
ENSMUST00000137649 N/A N/A 2.378±0.18 N/A 2.179±0.09 N/A 2.271±0.04 3.063±0.00 N/A 4.644±2.27 2.377±0.66 2.246±0.26
ENSMUST00000142610 N/A N/A 3.902±0.67 6.489±0.00 3.499±0.30 N/A 3.162±0.00 4.609±0.15 4.525±0.00 8.555±2.28 3.089±0.84 3.143±0.43
ENSMUST00000154531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.377±0.80 0.612±0.00
ENSMUST00000155225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.096±0.00
ENSMUST00000155735 N/A N/A N/A N/A 3.385±0.00 N/A N/A N/A N/A 4.878±2.21 3.158±1.13 1.108±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VX CIL_0000VX_0002 CGP 15:76703553-76717699
CIL_00099W CIL_00099W_0002 VISTA 15:76709335-77309403
CIL_0000VW CIL_0000VW_0002 CGP 15:76710623-76723845

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036493 PRAMEF1 PRAME family member 1 protein_coding Danio_rerio
ENSG00000160959 LRRC14 leucine rich repeat containing 14 protein_coding Homo_sapiens

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