C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000XR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000149636-ENSG00000149639 CGP 9606 20:36751791-36863686
GeneTranscriptPositionBiotype
ENSG00000149636 (DSN1)
DSN1, MIS12 kinetochore complex component 		ENST00000373734 (DSN1-009) 36751795-36773818 protein_coding
ENST00000373740 (DSN1-003) 36751795-36773720 protein_coding
ENST00000373750 (DSN1-001) 36751795-36773815 protein_coding
ENST00000426836 (DSN1-201) 36751791-36773751 protein_coding
ENST00000438549 (DSN1-007) 36758087-36773770 protein_coding
ENST00000447406 (DSN1-004) 36758087-36773799 protein_coding
ENST00000448110 (DSN1-006) 36751795-36773760 protein_coding
ENST00000473615 (DSN1-008) 36751795-36773797 processed_transcript
ENST00000480153 (DSN1-002) 36751795-36773798 retained_intron
ENST00000492703 (DSN1-005) 36758087-36773749 processed_transcript
ENSG00000149639 (SOGA1)
suppressor of glucose, autophagy associated 1 		ENST00000237536 (SOGA1-005) 36777442-36863686 protein_coding
ENST00000279034 (SOGA1-003) 36777449-36859873 protein_coding
ENST00000463491 (SOGA1-004) 36828597-36839402 retained_intron
ENST00000465671 (SOGA1-001) 36783782-36816281 nonsense_mediated_decay
CIL_0000XR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027635-ENSMUSG00000055485 CGP 10090 2:156995265-157079254
GeneTranscriptPositionBiotype
ENSMUSG00000027635 (Dsn1)
DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) 		ENSMUST00000103129 (Dsn1-001) 156995265-157007075 protein_coding
ENSMUST00000103130 (Dsn1-002) 156995277-157007154 protein_coding
ENSMUST00000124671 (Dsn1-004) 157002740-157006301 protein_coding
ENSMUST00000141388 (Dsn1-007) 157001685-157003256 retained_intron
ENSMUST00000146413 (Dsn1-005) 156997724-157007030 protein_coding
ENSMUST00000154213 (Dsn1-003) 157005320-157006574 protein_coding
ENSMUSG00000055485 (Soga1)
suppressor of glucose, autophagy associated 1 		ENSMUST00000069098 (Soga1-001) 157015799-157079254 protein_coding
ENSMUST00000133571 (Soga1-002) 157037050-157040239 processed_transcript
ENSMUST00000153229 (Soga1-003) 157020870-157027472 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XR_0001ENSG00000149636ENST00000373734ENST00000373740ENST00000373750ENST00000426836ENST00000438549ENST00000447406ENST00000448110ENST00000473615ENST00000480153ENST00000492703ENSG00000149639ENST00000237536ENST00000279034ENST00000463491ENST00000465671CIL_0000XR_0002ENSMUSG00000027635ENSMUST00000103129ENSMUST00000103130ENSMUST00000124671ENSMUST00000141388ENSMUST00000146413ENSMUST00000154213ENSMUSG00000055485ENSMUST00000069098ENSMUST00000133571ENSMUST00000153229
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XR_0001ENSG00000149636ENST00000373734ENST00000373740ENST00000373750ENST00000426836ENST00000438549ENST00000447406ENST00000448110ENST00000473615ENST00000480153ENSG00000149639ENST00000237536ENST00000279034ENST00000465671CIL_0000XR_0002ENSMUSG00000027635ENSMUST00000103129ENSMUST00000103130ENSMUST00000141388ENSMUST00000146413ENSMUST00000154213ENSMUSG00000055485ENSMUST00000069098
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149636 ENST00000373734 N/A N/A N/A 0.341±0.00 1.074±0.00 N/A N/A 1.202±0.00 0.201±0.00 N/A 0.573±0.00 1.150±0.00 N/A 8.535±0.00
ENST00000373740 0.572±0.00 N/A N/A N/A N/A N/A 0.291±0.00 0.675±0.49 N/A 0.683±0.00 N/A N/A N/A N/A
ENST00000373750 1.343±0.00 N/A N/A N/A 1.056±0.00 0.992±0.37 0.262±0.00 N/A N/A N/A N/A 0.932±0.30 2.031±0.61 N/A
ENST00000426836 0.365±0.00 1.211±0.00 N/A 0.259±0.00 N/A N/A N/A N/A N/A 0.314±0.00 N/A 0.695±0.00 0.998±0.13 N/A
ENST00000438549 N/A N/A 0.810±0.00 N/A N/A N/A N/A 1.045±0.00 N/A N/A N/A N/A N/A N/A
ENST00000447406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A N/A N/A
ENST00000448110 N/A 1.605±0.00 N/A 1.087±0.24 0.615±0.00 N/A 0.824±0.00 0.629±0.03 0.502±0.00 0.397±0.00 0.348±0.00 0.742±0.02 1.381±0.72 2.615±0.00
ENST00000473615 N/A N/A N/A N/A N/A N/A 0.345±0.00 N/A 0.331±0.00 0.405±0.00 N/A N/A N/A N/A
ENST00000480153 N/A N/A N/A N/A 0.533±0.00 N/A 0.294±0.11 N/A 0.480±0.00 0.170±0.00 0.117±0.00 2.736±0.00 N/A 3.787±0.00
ENST00000492703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000149639 ENST00000237536 1.387±0.00 0.424±0.00 0.749±0.00 5.115±0.00 2.481±0.66 1.565±0.30 2.248±1.74 1.276±1.10 1.774±1.62 2.354±0.56 0.682±0.00 3.347±2.19 3.298±0.37 3.335±0.55
ENST00000279034 N/A N/A N/A N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A N/A
ENST00000463491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465671 N/A N/A N/A N/A N/A N/A 0.349±0.00 N/A N/A N/A 0.246±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027635 ENSMUST00000103129 1.227±0.21 0.473±0.14 1.449±0.17 3.931±1.19 0.482±0.07 1.039±0.25 0.128±0.02 0.609±0.29 7.826±8.08 0.420±0.28 0.358±0.12 2.726±0.97 5.288±3.72 9.251±3.47
ENSMUST00000103130 N/A N/A N/A N/A 0.191±0.02 0.387±0.10 0.117±0.00 0.146±0.01 1.133±0.79 0.177±0.00 N/A 0.647±0.25 0.934±0.28 1.575±0.00
ENSMUST00000124671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141388 N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A 0.317±0.00 N/A N/A N/A N/A N/A
ENSMUST00000146413 N/A N/A N/A N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A
ENSMUST00000154213 N/A 0.349±0.08 N/A N/A 0.520±0.00 0.930±0.00 0.300±0.00 N/A N/A N/A N/A 1.874±0.00 N/A 3.667±0.00
ENSMUSG00000055485 ENSMUST00000069098 N/A 6.366±3.11 N/A 6.750±0.49 2.874±1.61 1.746±0.88 N/A 0.809±0.00 0.741±0.36 6.429±0.00 0.394±0.21 3.567±1.97 6.549±1.76 1.028±0.00
ENSMUST00000133571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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