C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00010Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130307-ENSG00000130307 CGP 9606 19:17249176-17282786
GeneTranscriptPositionBiotype
ENSG00000105393 (BABAM1)
BRISC and BRCA1 A complex member 1 		ENST00000359435 (BABAM1-005) 17267386-17279337 protein_coding
ENST00000447614 (BABAM1-201) 17267376-17279048 protein_coding
ENST00000448635 (BABAM1-014) 17267478-17276555 processed_transcript
ENST00000594247 (BABAM1-002) 17267376-17281249 nonsense_mediated_decay
ENST00000595393 (BABAM1-003) 17267443-17277523 retained_intron
ENST00000595632 (BABAM1-011) 17267502-17279172 protein_coding
ENST00000596335 (BABAM1-013) 17267471-17276556 protein_coding
ENST00000598188 (BABAM1-001) 17267350-17279337 protein_coding
ENST00000598382 (BABAM1-017) 17276428-17278984 retained_intron
ENST00000598567 (BABAM1-012) 17268997-17279339 protein_coding
ENST00000599057 (BABAM1-007) 17267443-17274185 protein_coding
ENST00000599474 (BABAM1-006) 17267437-17276525 protein_coding
ENST00000601043 (BABAM1-004) 17267443-17279337 protein_coding
ENST00000601171 (BABAM1-008) 17267457-17274173 nonsense_mediated_decay
ENST00000601232 (BABAM1-016) 17276814-17279342 nonsense_mediated_decay
ENST00000601436 (BABAM1-015) 17267474-17275825 protein_coding
ENST00000601938 (BABAM1-009) 17268559-17276550 protein_coding
ENST00000602066 (BABAM1-010) 17268685-17276602 protein_coding
ENSG00000269307 (CTD-2278I10.6)
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000469159} 		ENST00000596542 (CTD-2278I10.6-001) 17267418-17282966 nonsense_mediated_decay
CIL_00010Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034911-ENSMUSG00000031820 CGP 10090 8:71384274-71404772
GeneTranscriptPositionBiotype
ENSMUSG00000031820 (Babam1)
BRISC and BRCA1 A complex member 1 		ENSMUST00000002473 (Babam1-201) 71396855-71404772 protein_coding
ENSMUSG00000034911 (Ushbp1)
Usher syndrome 1C binding protein 1 		ENSMUST00000049184 (Ushbp1-201) 71384274-71395801 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00010Q_0001ENSG00000105393ENST00000359435ENST00000447614ENST00000448635ENST00000594247ENST00000595393ENST00000595632ENST00000596335ENST00000598188ENST00000598382ENST00000598567ENST00000599057ENST00000599474ENST00000601043ENST00000601171ENST00000601232ENST00000601436ENST00000601938ENST00000602066ENSG00000269307ENST00000596542CIL_00010Q_0002ENSMUSG00000031820ENSMUST00000002473ENSMUSG00000034911ENSMUST00000049184
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00010Q_0001ENSG00000105393ENST00000359435ENST00000595632ENST00000598188ENST00000599474ENST00000601043ENST00000601171ENST00000602066ENSG00000269307ENST00000596542CIL_00010Q_0002ENSMUSG00000031820ENSMUST00000002473ENSMUSG00000034911ENSMUST00000049184
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105393 ENST00000359435 N/A N/A 1.222±0.00 9.809±0.00 2.019±0.00 9.389±0.00 N/A N/A 3.458±0.00 2.071±0.00 8.554±0.00 15.005±6.03 29.481±0.00 13.826±0.00
ENST00000447614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595632 N/A N/A N/A 15.547±0.00 N/A 14.250±0.00 N/A N/A N/A N/A N/A N/A N/A 15.518±0.00
ENST00000596335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598188 12.468±0.00 N/A N/A 10.378±0.00 N/A N/A 2.146±0.00 N/A N/A 2.531±0.00 3.450±0.00 18.665±0.00 28.027±0.00 13.933±0.00
ENST00000598382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599474 N/A N/A N/A N/A 3.545±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601043 N/A 40.147±0.00 0.828±0.00 24.955±0.00 32.335±0.00 10.909±0.00 18.332±0.00 15.884±11.05 21.386±0.00 29.588±0.00 32.147±0.00 42.070±0.00 41.290±3.01 15.018±0.00
ENST00000601171 N/A N/A 2.825±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602066 N/A N/A 1.962±0.00 N/A N/A N/A N/A N/A 3.292±0.00 3.598±0.00 N/A N/A N/A N/A
ENSG00000269307 ENST00000596542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.384±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031820 ENSMUST00000002473 29.257±6.57 62.087±2.26 25.972±1.60 36.854±9.70 37.029±12.14 43.829±5.85 25.483±4.53 47.081±7.42 38.381±6.11 35.720±6.85 21.107±4.07 48.679±13.98 22.303±7.59 23.671±4.82
ENSMUSG00000034911 ENSMUST00000049184 12.934±10.35 4.874±0.91 1.734±0.30 1.096±0.61 5.373±0.67 1.628±0.71 6.794±2.21 3.110±0.67 1.167±0.65 16.677±3.24 1.191±0.33 4.902±2.24 2.376±2.90 0.140±0.06

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