C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159723-ENSG00000039523 CGP 9606 16:67482571-67546788
GeneTranscriptPositionBiotype
ENSG00000039523 (FAM65A)
family with sequence similarity 65, member A 		ENST00000042381 (FAM65A-001) 67528870-67546786 protein_coding
ENST00000379312 (FAM65A-002) 67528817-67546786 protein_coding
ENST00000422602 (FAM65A-201) 67529637-67546785 protein_coding
ENST00000428437 (FAM65A-006) 67537454-67546788 protein_coding
ENST00000540839 (FAM65A-003) 67528881-67546786 protein_coding
ENST00000561534 (FAM65A-024) 67538965-67541578 retained_intron
ENST00000562116 (FAM65A-004) 67518418-67538471 protein_coding
ENST00000562755 (FAM65A-007) 67528288-67539021 protein_coding
ENST00000564616 (FAM65A-018) 67542999-67543826 retained_intron
ENST00000565176 (FAM65A-023) 67531548-67540094 protein_coding
ENST00000565190 (FAM65A-020) 67545372-67546067 retained_intron
ENST00000565679 (FAM65A-019) 67545537-67546005 retained_intron
ENST00000566522 (FAM65A-010) 67528867-67540704 processed_transcript
ENST00000566559 (FAM65A-005) 67538078-67542668 protein_coding
ENST00000566730 (FAM65A-014) 67540125-67541577 retained_intron
ENST00000566815 (FAM65A-013) 67538464-67541578 nonsense_mediated_decay
ENST00000566907 (FAM65A-008) 67529347-67538544 protein_coding
ENST00000566920 (FAM65A-009) 67529791-67538996 protein_coding
ENST00000568959 (FAM65A-022) 67544394-67545797 protein_coding
ENST00000569179 (FAM65A-021) 67540353-67541713 protein_coding
ENST00000569253 (FAM65A-011) 67537473-67542665 protein_coding
ENST00000569474 (FAM65A-015) 67539865-67541758 retained_intron
ENST00000569733 (FAM65A-017) 67541347-67546786 retained_intron
ENSG00000159723 (AGRP)
agouti related neuropeptide 		ENST00000290953 (AGRP-001) 67482571-67483813 protein_coding
ENSG00000270049 (RP11-297D21.4)
 ENST00000602476 (RP11-297D21.4-002) 67484242-67487250 antisense
ENST00000602592 (RP11-297D21.4-003) 67481314-67481956 antisense
ENST00000602596 (RP11-297D21.4-001) 67481384-67484669 antisense
CIL_0001GR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005705-ENSMUSG00000038604 CGP 10090 8:105566700-105622194
GeneTranscriptPositionBiotype
ENSMUSG00000005705 (Agrp)
agouti related protein 		ENSMUST00000005849 (Agrp-201) 105566700-105568298 protein_coding
ENSMUSG00000038604 (Fam65a)
family with sequence similarity 65, member A 		ENSMUST00000043531 (Fam65a-201) 105605229-105622194 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GR_0001ENSG00000039523ENST00000042381ENST00000379312ENST00000422602ENST00000428437ENST00000540839ENST00000561534ENST00000562116ENST00000562755ENST00000564616ENST00000565176ENST00000565190ENST00000565679ENST00000566522ENST00000566559ENST00000566730ENST00000566815ENST00000566907ENST00000566920ENST00000568959ENST00000569179ENST00000569253ENST00000569474ENST00000569733ENSG00000159723ENST00000290953ENSG00000270049ENST00000602476ENST00000602592ENST00000602596CIL_0001GR_0002ENSMUSG00000005705ENSMUST00000005849ENSMUSG00000038604ENSMUST00000043531
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GR_0001ENSG00000039523ENST00000042381ENST00000379312ENST00000428437ENST00000561534ENST00000565176ENST00000565190ENST00000566522ENST00000566559ENST00000566815ENST00000568959ENST00000569253ENSG00000159723ENST00000290953ENSG00000270049ENST00000602476ENST00000602592ENST00000602596CIL_0001GR_0002ENSMUSG00000005705ENSMUST00000005849ENSMUSG00000038604ENSMUST00000043531
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000039523 ENST00000042381 10.304±0.00 12.614±0.00 2.335±0.00 13.031±0.00 6.886±0.00 7.075±0.00 9.886±0.00 15.697±0.00 2.331±0.23 14.533±0.00 9.426±8.95 13.231±6.50 11.048±4.31 5.829±3.44
ENST00000379312 N/A N/A N/A N/A N/A 0.385±0.00 2.393±1.64 N/A N/A N/A N/A 0.570±0.00 N/A N/A
ENST00000422602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428437 11.977±0.00 12.646±0.00 N/A N/A 5.302±0.00 4.261±0.00 3.539±0.00 N/A 1.631±0.00 6.636±5.77 N/A 5.671±3.46 12.053±1.48 3.873±0.00
ENST00000540839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.665±0.00 N/A N/A N/A
ENST00000562116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.930±0.00 N/A N/A
ENST00000565190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.897±0.00 N/A N/A
ENST00000565679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566522 N/A N/A N/A N/A 8.519±0.00 N/A N/A N/A N/A 6.927±0.00 N/A 8.953±6.67 26.562±0.00 11.217±0.00
ENST00000566559 N/A N/A N/A N/A 1.973±0.00 0.975±0.00 N/A N/A 1.718±0.00 N/A 0.482±0.00 N/A N/A N/A
ENST00000566730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566815 N/A N/A N/A N/A N/A N/A 1.399±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000566907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.127±0.00 39.406±0.00 16.468±0.00
ENST00000569179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569253 N/A N/A 4.290±0.00 13.307±0.00 N/A N/A 1.340±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000569474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000159723 ENST00000290953 0.169±0.00 0.143±0.00 N/A 0.123±0.08 N/A 0.303±0.00 0.069±0.00 0.694±0.00 N/A N/A N/A 0.180±0.16 0.150±0.07 1.610±1.05
ENSG00000270049 ENST00000602476 N/A 0.248±0.00 N/A N/A 0.401±0.30 N/A N/A N/A N/A 0.286±0.00 N/A 0.490±0.24 0.223±0.00 1.269±0.00
ENST00000602592 N/A N/A N/A 0.090±0.00 0.250±0.00 N/A 0.062±0.00 0.402±0.00 N/A 0.317±0.00 N/A N/A N/A 0.287±0.11
ENST00000602596 0.236±0.00 1.117±0.00 0.407±0.00 0.133±0.00 0.820±0.49 0.428±0.27 0.210±0.06 0.267±0.00 0.180±0.04 0.561±0.51 1.286±0.00 0.683±0.44 0.411±0.04 0.764±0.29
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005705 ENSMUST00000005849 0.102±0.04 1.822±0.78 0.123±0.00 0.468±0.01 0.493±0.19 0.251±0.08 0.181±0.00 N/A 0.081±0.02 0.950±0.30 0.139±0.06 1.302±0.43 3.156±1.61 0.437±0.00
ENSMUSG00000038604 ENSMUST00000043531 14.226±1.08 12.364±1.81 7.686±3.05 17.343±7.28 10.776±2.53 9.700±1.90 10.527±2.71 17.961±1.66 3.213±1.03 30.490±3.09 5.363±0.79 10.324±2.26 31.617±18.56 1.904±0.59

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