C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001JP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002463-ENSDARG00000056563 CGP 7955 14:25848223-26076678
GeneTranscriptPositionBiotype
ENSDARG00000002463 (CU074314.1)
Uncharacterized protein 		ENSDART00000106039 (CU074314.1-201) 25848223-25872579 protein_coding
ENSDARG00000056563 (ppargc1b)
peroxisome proliferative activated receptor, gamma, coactivator 1, beta 		ENSDART00000079080 (ppargc1b-001) 26013242-26076678 protein_coding
CIL_0001JP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183111-ENSG00000155846 CGP 9606 5:149551947-149855022
GeneTranscriptPositionBiotype
ENSG00000155846 (PPARGC1B)
peroxisome proliferator-activated receptor gamma, coactivator 1 beta 		ENST00000309241 (PPARGC1B-001) 149730311-149855022 protein_coding
ENST00000360453 (PPARGC1B-005) 149730298-149847562 protein_coding
ENST00000394320 (PPARGC1B-003) 149730301-149847704 protein_coding
ENST00000403750 (PPARGC1B-002) 149771940-149847627 protein_coding
ENST00000434684 (PPARGC1B-004) 149833015-149847718 protein_coding
ENST00000461780 (PPARGC1B-006) 149730303-149817746 processed_transcript
ENST00000492495 (PPARGC1B-008) 149845643-149847757 retained_intron
ENSG00000183111 (ARHGEF37)
Rho guanine nucleotide exchange factor (GEF) 37 		ENST00000333677 (ARHGEF37-001) 149581473-149634968 protein_coding
ENST00000505810 (ARHGEF37-002) 149551947-149601231 protein_coding
ENST00000509831 (ARHGEF37-003) 149626897-149632036 retained_intron
ENSG00000199047 (MIR378A)
microRNA 378a 		ENST00000362177 (MIR378A-201) 149732797-149732908 miRNA
ENSG00000221043 (U3)
Small nucleolar RNA U3 		ENST00000408116 (U3.1-235) 149695748-149695959 snoRNA
ENSG00000221135 (AC021078.1)
 ENST00000408208 (AC021078.1-201) 149604276-149604417 miRNA
ENSG00000222213 (RNU6-588P)
RNA, U6 small nuclear 588, pseudogene 		ENST00000410281 (RNU6-588P-201) 149606637-149606741 snRNA
ENSG00000242928 (RN7SL868P)
RNA, 7SL, cytoplasmic 868, pseudogene 		ENST00000485915 (RN7SL868P-201) 149722070-149722372 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JP_0001ENSDARG00000002463ENSDART00000106039ENSDARG00000056563ENSDART00000079080CIL_0001JP_0002ENSG00000155846ENST00000309241ENST00000360453ENST00000394320ENST00000403750ENST00000434684ENST00000461780ENST00000492495ENSG00000183111ENST00000333677ENST00000505810ENST00000509831ENSG00000199047ENST00000362177ENSG00000221043ENST00000408116ENSG00000221135ENST00000408208ENSG00000222213ENST00000410281ENSG00000242928ENST00000485915
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JP_0001ENSDARG00000002463ENSDART00000106039ENSDARG00000056563ENSDART00000079080CIL_0001JP_0002ENSG00000155846ENST00000309241ENST00000360453ENST00000394320ENST00000434684ENSG00000183111ENST00000333677ENSG00000199047ENST00000362177ENSG00000221043ENST00000408116ENSG00000221135ENST00000408208ENSG00000222213ENST00000410281ENSG00000242928ENST00000485915
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002463 ENSDART00000106039 N/A N/A N/A 0.832±0.01 N/A N/A 0.598±0.44 0.794±0.00 0.016±0.00 N/A 1.371±0.00 N/A N/A N/A
ENSDARG00000056563 ENSDART00000079080 N/A N/A N/A N/A N/A N/A 4.200±3.41 3.811±1.01 0.487±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155846 ENST00000309241 N/A N/A N/A 0.518±0.16 0.426±0.00 0.790±0.00 0.902±0.41 0.234±0.01 0.544±0.40 N/A 1.226±0.00 0.299±0.30 0.185±0.02 0.168±0.12
ENST00000360453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A
ENST00000394320 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A N/A N/A N/A
ENST00000403750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.00 N/A
ENST00000461780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183111 ENST00000333677 1.280±0.00 1.789±0.00 0.520±0.00 4.809±3.63 1.518±1.34 2.939±1.80 2.792±2.49 1.105±0.92 0.337±0.12 2.150±0.00 2.279±0.88 0.899±0.52 0.778±0.39 2.179±0.00
ENST00000505810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199047 ENST00000362177 N/A N/A N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A N/A
ENSG00000221043 ENST00000408116 N/A N/A N/A N/A N/A N/A 0.158±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000221135 ENST00000408208 N/A 0.172±0.00 N/A N/A N/A N/A 0.088±0.00 0.082±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000222213 ENST00000410281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00
ENSG00000242928 ENST00000485915 N/A 0.168±0.00 N/A N/A 0.288±0.00 0.052±0.00 0.109±0.00 0.057±0.00 0.104±0.00 N/A N/A N/A N/A N/A

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