C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001MM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075485-ENSDARG00000019800 CGP 7955 7:7710099-7770277
GeneTranscriptPositionBiotype
ENSDARG00000019800 (PACS1 (1 of 3))
phosphofurin acidic cluster sorting protein 1
ENSDART00000129818 (PACS1 (1 of 3)-201) 7750211-7770277 protein_coding
CIL_0001MM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024862-ENSMUSG00000024855 CGP 10090 19:5107746-5273119
GeneTranscriptPositionBiotype
ENSMUSG00000024855 (Pacs1)
phosphofurin acidic cluster sorting protein 1
ENSMUST00000025786 (Pacs1-201) 5133688-5273119 protein_coding
ENSMUSG00000024862 (Klc2)
kinesin light chain 2
ENSMUST00000025798 (Klc2-001) 5107746-5118300 protein_coding
ENSMUST00000113727 (Klc2-007) 5107748-5118298 protein_coding
ENSMUST00000113728 (Klc2-008) 5107746-5118297 protein_coding
ENSMUST00000116563 (Klc2-002) 5107746-5118560 protein_coding
ENSMUST00000135827 (Klc2-004) 5113510-5114010 retained_intron
ENSMUST00000137403 (Klc2-006) 5109427-5111445 retained_intron
ENSMUST00000142255 (Klc2-009) 5108169-5109480 retained_intron
ENSMUST00000149806 (Klc2-005) 5110367-5111984 retained_intron
ENSMUST00000156717 (Klc2-003) 5113810-5117586 protein_coding
ENSMUSG00000098803 (Gm27468)
predicted gene, 27468
ENSMUST00000183577 (Gm27468-201) 5201198-5201303 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001MM_0001ENSDARG00000019800ENSDART00000129818CIL_0001MM_0002ENSMUSG00000024855ENSMUST00000025786ENSMUSG00000024862ENSMUST00000025798ENSMUST00000113727ENSMUST00000113728ENSMUST00000116563ENSMUST00000135827ENSMUST00000137403ENSMUST00000142255ENSMUST00000149806ENSMUST00000156717ENSMUSG00000098803ENSMUST00000183577
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001MM_0001ENSDARG00000019800ENSDART00000129818CIL_0001MM_0002ENSMUSG00000024855ENSMUST00000025786ENSMUSG00000024862ENSMUST00000025798ENSMUST00000113727ENSMUST00000113728ENSMUST00000116563ENSMUST00000137403ENSMUST00000142255ENSMUST00000156717ENSMUSG00000098803ENSMUST00000183577
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019800 ENSDART00000129818 N/A N/A N/A 2.498±1.05 N/A N/A 2.251±0.49 1.740±0.48 0.094±0.00 N/A 0.595±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024855 ENSMUST00000025786 8.227±2.80 16.617±0.95 6.867±0.26 20.802±8.63 14.686±6.10 5.352±0.92 6.789±0.55 4.686±1.08 3.910±3.70 13.737±2.80 2.113±0.39 21.627±5.38 9.053±3.21 53.561±24.04
ENSMUSG00000024862 ENSMUST00000025798 3.165±0.50 7.886±0.61 2.977±0.11 9.076±0.30 3.283±0.68 3.177±0.76 5.733±1.27 4.520±0.81 0.895±0.36 4.085±0.91 6.412±1.21 18.981±2.24 2.253±0.22 9.509±0.79
ENSMUST00000113727 N/A N/A N/A N/A 2.483±0.69 N/A 1.793±0.00 2.495±0.81 N/A N/A N/A N/A N/A N/A
ENSMUST00000113728 N/A N/A N/A N/A 3.163±0.00 2.654±0.00 N/A N/A N/A N/A N/A 20.021±0.00 N/A N/A
ENSMUST00000116563 2.475±0.67 2.841±0.64 4.674±0.70 46.362±38.36 2.301±0.59 2.690±1.08 7.736±1.15 5.300±1.21 1.019±0.30 3.512±0.76 13.928±1.80 15.675±9.30 5.106±2.22 20.647±0.90
ENSMUST00000135827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137403 N/A N/A N/A 111.559±0.00 N/A N/A N/A N/A N/A N/A N/A 41.526±21.20 8.798±3.56 37.361±0.00
ENSMUST00000142255 N/A 20.370±3.26 N/A N/A 6.129±1.71 3.855±0.00 N/A N/A 2.372±0.67 N/A N/A N/A N/A N/A
ENSMUST00000149806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 66.032±0.00 N/A 35.619±0.00
ENSMUSG00000098803 ENSMUST00000183577 N/A N/A N/A N/A N/A N/A N/A N/A 62.493±0.00 N/A N/A N/A N/A N/A

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