C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079227-ENSDARG00000053776 CGP 7955 12:32090598-32112570
GeneTranscriptPositionBiotype
ENSDARG00000053776 (dclre1a)
DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) 		ENSDART00000075876 (dclre1a-201) 32098103-32112570 protein_coding
ENSDARG00000079227 (plekhs1)
pleckstrin homology domain containing, family S member 1 		ENSDART00000128525 (plekhs1-201) 32091271-32096137 protein_coding
ENSDART00000152896 (plekhs1-002) 32090611-32096441 protein_coding
ENSDART00000153191 (plekhs1-001) 32090598-32096441 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001QZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148735-ENSG00000198924 CGP 9606 10:113751454-113854383
GeneTranscriptPositionBiotype
ENSG00000148735 (PLEKHS1)
pleckstrin homology domain containing, family S member 1 		ENST00000354462 (PLEKHS1-002) 113772028-113783429 protein_coding
ENST00000361048 (PLEKHS1-201) 113751454-113782432 protein_coding
ENST00000369309 (PLEKHS1-001) 113771253-113782433 protein_coding
ENST00000369310 (PLEKHS1-003) 113764819-113777726 protein_coding
ENST00000369312 (PLEKHS1-202) 113751454-113782432 protein_coding
ENST00000448805 (PLEKHS1-004) 113774916-113777730 protein_coding
ENST00000619563 (PLEKHS1-203) 113751454-113782432 protein_coding
ENSG00000198924 (DCLRE1A)
DNA cross-link repair 1A 		ENST00000361384 (DCLRE1A-002) 113834725-113854100 protein_coding
ENST00000369305 (DCLRE1A-001) 113834729-113854383 protein_coding
ENST00000476112 (DCLRE1A-003) 113853243-113854340 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0001QZ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035818-ENSMUSG00000025077 CGP 10090 19:56461637-56548222
GeneTranscriptPositionBiotype
ENSMUSG00000035818 (Plekhs1)
pleckstrin homology domain containing, family S member 1 		ENSMUST00000039666 (Plekhs1-201) 56461637-56486729 protein_coding
ENSMUST00000178590 (Plekhs1-202) 56461637-56486729 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QZ_0001ENSDARG00000053776ENSDART00000075876ENSDARG00000079227ENSDART00000128525ENSDART00000152896ENSDART00000153191CIL_0001QZ_0002ENSG00000148735ENST00000354462ENST00000361048ENST00000369309ENST00000369310ENST00000369312ENST00000448805ENST00000619563ENSG00000198924ENST00000361384ENST00000369305ENST00000476112CIL_0001QZ_0003ENSMUSG00000035818ENSMUST00000039666ENSMUST00000178590
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QZ_0001ENSDARG00000053776ENSDART00000075876ENSDARG00000079227ENSDART00000128525ENSDART00000152896ENSDART00000153191CIL_0001QZ_0002ENSG00000148735ENST00000354462ENST00000361048ENST00000369309ENST00000369310ENST00000369312ENSG00000198924ENST00000361384ENST00000369305ENST00000476112CIL_0001QZ_0003ENSMUSG00000035818ENSMUST00000039666ENSMUST00000178590
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053776 ENSDART00000075876 N/A N/A N/A 0.498±0.22 N/A N/A 0.535±0.04 N/A 0.146±0.00 N/A 0.211±0.00 N/A N/A N/A
ENSDARG00000079227 ENSDART00000128525 N/A N/A N/A 0.064±0.01 N/A N/A 0.094±0.01 0.135±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000152896 N/A N/A N/A 0.147±0.00 N/A N/A 0.304±0.00 0.769±0.25 N/A N/A N/A N/A N/A N/A
ENSDART00000153191 N/A N/A N/A N/A N/A N/A N/A 0.277±0.21 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148735 ENST00000354462 0.012±0.00 0.078±0.00 N/A 0.048±0.00 1.813±0.00 0.038±0.00 0.043±0.00 0.205±0.00 0.007±0.00 0.455±0.00 N/A 0.382±0.11 0.011±0.00 N/A
ENST00000361048 N/A N/A N/A N/A 0.608±0.00 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369309 N/A N/A N/A N/A 0.939±0.00 0.011±0.00 N/A 0.082±0.00 N/A 0.527±0.00 N/A N/A N/A 0.597±0.14
ENST00000369310 N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A 0.009±0.00 N/A N/A N/A 0.023±0.00 N/A
ENST00000369312 N/A N/A N/A N/A 0.965±0.00 N/A N/A N/A N/A 0.356±0.13 N/A 0.467±0.00 N/A N/A
ENST00000448805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198924 ENST00000361384 N/A 0.695±0.00 N/A 1.176±0.15 0.594±0.38 0.337±0.00 0.424±0.20 1.008±0.45 0.554±0.08 1.309±0.00 N/A 0.979±0.36 0.440±0.31 0.319±0.08
ENST00000369305 0.461±0.00 0.340±0.00 0.248±0.00 0.943±0.00 0.179±0.00 N/A 0.432±0.00 0.580±0.00 1.373±0.00 0.429±0.00 0.313±0.00 1.789±1.12 1.376±0.51 1.800±0.08
ENST00000476112 N/A N/A 0.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035818 ENSMUST00000039666 5.581±6.02 N/A 0.224±0.00 0.007±0.00 0.162±0.06 0.133±0.05 0.015±0.01 0.033±0.01 0.026±0.01 0.051±0.05 0.029±0.01 4.125±1.29 0.036±0.03 0.060±0.01
ENSMUST00000178590 4.646±6.51 N/A 0.122±0.06 0.040±0.03 0.211±0.17 0.221±0.09 0.015±0.01 0.034±0.01 0.026±0.01 0.018±0.01 0.028±0.01 2.777±1.22 0.037±0.03 0.090±0.05

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