C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA cross-link repair 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361384 DCLRE1A-002 ENSG00000198924 9606 - 10:113834725-113854100 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000361384
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000361384 0.695±0.00 1.176±0.15 0.594±0.38 0.337±0.00 0.424±0.20 1.008±0.45 0.554±0.08 1.309±0.00 0.979±0.36 0.440±0.31 0.319±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QZ CIL_0001QZ_0002 CGP 10:113751454-113854383
CIL_0001QY CIL_0001QY_0002 CGP 10:113834725-113917194

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006289 IEA nucleotide-excision repair
GO:0007067 IEA mitotic nuclear division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182276 Dclre1a-001 protein_coding Mus_musculus 0 1147
ENSMUST00000183143 Dclre1a-002 nonsense_mediated_decay Mus_musculus 0 824
ENSMUST00000182058 Dclre1a-003 retained_intron Mus_musculus 0 809
ENSMUST00000183216 Dclre1a-006 retained_intron Mus_musculus 0 460

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