C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001RT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161091-ENSG00000161091 CGP 9606 19:3538261-3574290
GeneTranscriptPositionBiotype
ENSG00000105325 (FZR1)
fizzy/cell division cycle 20 related 1 (Drosophila) 		ENST00000313639 (FZR1-003) 3522990-3534836 protein_coding
ENST00000395095 (FZR1-002) 3522990-3534836 protein_coding
ENST00000441788 (FZR1-001) 3506273-3538330 protein_coding
ENST00000586212 (FZR1-006) 3532483-3533748 retained_intron
ENST00000588084 (FZR1-005) 3534285-3535236 retained_intron
ENST00000588327 (FZR1-008) 3506377-3527060 retained_intron
ENST00000591290 (FZR1-004) 3522984-3534839 nonsense_mediated_decay
ENST00000592214 (FZR1-007) 3526100-3531766 retained_intron
ENSG00000266959 (AC005786.3)
 ENST00000588553 (AC005786.3-001) 3568120-3568273 processed_pseudogene
ENSG00000267231 (AC005786.5)
 ENST00000592368 (AC005786.5-001) 3558015-3558486 lincRNA
ENSG00000267436 (AC005786.7)
 ENST00000589360 (AC005786.7-001) 3544199-3557569 antisense
ENSG00000279590 (AC005786.6)
 ENST00000623369 (AC005786.6-001) 3567278-3567959 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0001RT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034854-ENSMUSG00000034854 CGP 10090 10:81357491-81366225
GeneTranscriptPositionBiotype
ENSMUSG00000020234 (4930404N11Rik)
RIKEN cDNA 4930404N11 gene 		ENSMUST00000020456 (4930404N11Rik-001) 81364024-81365816 protein_coding
ENSMUST00000124512 (4930404N11Rik-004) 81363923-81364876 retained_intron
ENSMUST00000130762 (4930404N11Rik-002) 81364047-81365790 retained_intron
ENSMUST00000131736 (4930404N11Rik-003) 81363067-81364854 protein_coding
ENSMUSG00000020235 (Fzr1)
fizzy/cell division cycle 20 related 1 (Drosophila) 		ENSMUST00000020457 (Fzr1-003) 81367098-81378451 nonsense_mediated_decay
ENSMUST00000118812 (Fzr1-004) 81367509-81371413 protein_coding
ENSMUST00000127203 (Fzr1-005) 81375363-81378380 processed_transcript
ENSMUST00000138343 (Fzr1-002) 81367372-81378463 retained_intron
ENSMUST00000140901 (Fzr1-001) 81366222-81378516 protein_coding
ENSMUST00000150824 (Fzr1-006) 81368276-81369541 retained_intron
ENSMUSG00000034854 (Mfsd12)
major facilitator superfamily domain containing 12 		ENSMUST00000044844 (Mfsd12-001) 81357491-81366225 protein_coding
ENSMUST00000132368 (Mfsd12-002) 81357552-81361232 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RT_0001ENSG00000105325ENST00000313639ENST00000395095ENST00000441788ENST00000586212ENST00000588084ENST00000588327ENST00000591290ENST00000592214ENSG00000266959ENST00000588553ENSG00000267231ENST00000592368ENSG00000267436ENST00000589360ENSG00000279590ENST00000623369CIL_0001RT_0002ENSMUSG00000020234ENSMUST00000020456ENSMUST00000124512ENSMUST00000130762ENSMUST00000131736ENSMUSG00000020235ENSMUST00000020457ENSMUST00000118812ENSMUST00000127203ENSMUST00000138343ENSMUST00000140901ENSMUST00000150824ENSMUSG00000034854ENSMUST00000044844ENSMUST00000132368
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RT_0001ENSG00000105325ENST00000313639ENST00000395095ENST00000441788ENST00000591290ENSG00000266959ENST00000588553ENSG00000267231ENST00000592368ENSG00000267436ENST00000589360ENSG00000279590ENST00000623369CIL_0001RT_0002ENSMUSG00000020234ENSMUST00000020456ENSMUSG00000020235ENSMUST00000020457ENSMUST00000118812ENSMUST00000138343ENSMUST00000140901ENSMUSG00000034854ENSMUST00000044844ENSMUST00000132368
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105325 ENST00000313639 N/A N/A N/A N/A N/A 3.899±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.901±0.00
ENST00000441788 6.491±0.00 14.247±0.00 N/A 10.807±9.60 8.641±0.00 4.806±3.73 2.252±1.73 10.202±0.00 3.004±1.19 11.037±0.00 6.663±0.00 13.998±4.62 13.101±3.55 13.831±4.02
ENST00000586212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591290 N/A N/A N/A N/A N/A N/A N/A 3.550±0.00 N/A N/A N/A N/A N/A N/A
ENST00000592214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266959 ENST00000588553 0.107±0.00 0.223±0.00 N/A 0.111±0.00 N/A N/A N/A N/A N/A 0.422±0.00 N/A 0.445±0.00 N/A 0.394±0.00
ENSG00000267231 ENST00000592368 N/A N/A N/A 0.360±0.00 0.077±0.00 N/A N/A 0.077±0.00 N/A N/A N/A N/A 0.251±0.00 0.376±0.11
ENSG00000267436 ENST00000589360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 84.145±0.00 N/A
ENSG00000279590 ENST00000623369 0.191±0.00 0.635±0.00 N/A 0.415±0.00 0.568±0.00 0.180±0.00 0.083±0.00 0.130±0.00 N/A 0.038±0.00 N/A 0.097±0.04 N/A 0.331±0.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020234 ENSMUST00000020456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 125.933±11.97
ENSMUST00000124512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020235 ENSMUST00000020457 N/A N/A N/A 23.404±0.00 N/A N/A N/A N/A 19.670±1.11 N/A 3.846±1.30 10.460±2.32 16.175±2.83 25.308±5.03
ENSMUST00000118812 N/A N/A N/A 35.527±7.32 7.604±0.00 N/A N/A N/A 32.616±0.00 N/A N/A 44.583±11.83 20.712±2.14 56.729±9.53
ENSMUST00000127203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.003±0.00 N/A N/A N/A
ENSMUST00000140901 19.087±4.83 31.071±7.85 5.847±1.49 36.922±0.53 22.542±10.52 39.163±10.54 9.178±1.22 14.210±2.86 27.977±22.23 21.562±4.03 2.951±0.67 32.311±14.98 11.432±3.88 26.270±4.39
ENSMUST00000150824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034854 ENSMUST00000044844 12.888±0.75 12.300±1.27 5.593±0.51 7.874±0.00 13.397±6.38 13.371±1.73 3.376±0.33 8.456±0.93 6.585±2.64 9.667±2.06 1.214±0.00 10.730±2.32 11.591±2.40 16.228±1.40
ENSMUST00000132368 N/A 46.711±4.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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