C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001YF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106459-ENSG00000186591 CGP 9606 7:129611714-129952949
GeneTranscriptPositionBiotype
ENSG00000106459 (NRF1)
nuclear respiratory factor 1 		ENST00000223190 (NRF1-001) 129611756-129756015 protein_coding
ENST00000311967 (NRF1-002) 129611756-129756015 protein_coding
ENST00000353868 (NRF1-201) 129630078-129757080 protein_coding
ENST00000393230 (NRF1-003) 129630068-129757082 protein_coding
ENST00000393232 (NRF1-202) 129611714-129757080 protein_coding
ENST00000454688 (NRF1-005) 129611747-129709097 protein_coding
ENST00000477428 (NRF1-004) 129611739-129633780 processed_transcript
ENSG00000186591 (UBE2H)
ubiquitin-conjugating enzyme E2H 		ENST00000355621 (UBE2H-001) 129830732-129952949 protein_coding
ENST00000463272 (UBE2H-010) 129857079-129858969 retained_intron
ENST00000472396 (UBE2H-004) 129839204-129952943 protein_coding
ENST00000473814 (UBE2H-006) 129834937-129952631 protein_coding
ENST00000480245 (UBE2H-008) 129839225-129952531 nonsense_mediated_decay
ENST00000483368 (UBE2H-005) 129834978-129839741 retained_intron
ENST00000486283 (UBE2H-007) 129856973-129880976 retained_intron
ENST00000490974 (UBE2H-003) 129857548-129952722 protein_coding
ENST00000496698 (UBE2H-009) 129834941-129951327 protein_coding
ENSG00000207990 (MIR182)
microRNA 182 		ENST00000385255 (MIR182-201) 129770379-129770490 miRNA
ENSG00000242078 (RP11-738B7.1)
 ENST00000496217 (RP11-738B7.1-001) 129783370-129785185 lincRNA
CIL_0001YF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058440-ENSMUSG00000039159 CGP 10090 6:30047988-30304539
GeneTranscriptPositionBiotype
ENSMUSG00000065343 (Gm25580)
predicted gene, 25580 		ENSMUST00000083409 (Gm25580-201) 30143801-30144127 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YF_0001ENSG00000106459ENST00000223190ENST00000311967ENST00000353868ENST00000393230ENST00000393232ENST00000454688ENST00000477428ENSG00000186591ENST00000355621ENST00000463272ENST00000472396ENST00000473814ENST00000480245ENST00000483368ENST00000486283ENST00000490974ENST00000496698ENSG00000207990ENST00000385255ENSG00000242078ENST00000496217CIL_0001YF_0002ENSMUSG00000065343ENSMUST00000083409
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YF_0001ENSG00000106459ENST00000223190ENST00000311967ENST00000393230ENST00000393232ENSG00000186591ENST00000355621ENST00000473814ENSG00000207990ENST00000385255ENSG00000242078ENST00000496217CIL_0001YF_0002ENSMUSG00000065343ENSMUST00000083409
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106459 ENST00000223190 N/A N/A 0.428±0.00 N/A 0.948±0.00 0.305±0.00 0.531±0.04 0.622±0.00 0.788±0.00 0.834±0.33 1.120±0.38 1.546±0.00 1.168±0.26 N/A
ENST00000311967 N/A N/A N/A 1.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000353868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393230 N/A N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A 0.462±0.00 0.541±0.00
ENST00000393232 3.306±0.00 1.412±0.00 0.190±0.00 1.173±0.93 3.022±0.00 N/A 0.662±0.36 2.732±0.00 0.753±0.00 2.891±0.00 2.691±0.00 3.935±2.75 0.843±0.39 1.569±0.99
ENST00000454688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186591 ENST00000355621 17.855±0.00 9.776±0.00 3.814±0.00 19.008±6.24 13.355±11.66 12.768±10.31 13.500±11.95 9.955±7.62 8.693±0.57 16.445±13.48 11.249±8.89 22.279±10.83 23.159±3.51 16.155±3.85
ENST00000463272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.977±0.00 44.665±0.00
ENST00000480245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207990 ENST00000385255 N/A N/A N/A N/A 0.234±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242078 ENST00000496217 0.395±0.00 N/A N/A 0.398±0.00 0.120±0.00 0.326±0.00 0.101±0.00 0.823±0.00 0.097±0.00 0.541±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000065343 ENSMUST00000083409 0.308±0.09 0.229±0.02 0.488±0.07 0.354±0.06 0.762±0.45 0.440±0.25 0.274±0.08 0.529±0.51 0.603±0.43 0.603±0.30 0.610±0.34 1.093±0.75 0.432±0.09 0.428±0.08

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