C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001YR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014373-ENSDARG00000032769 CGP 7955 10:6548795-6609192
GeneTranscriptPositionBiotype
ENSDARG00000014373 (vasa)
vasa homolog
ENSDART00000105384 (vasa-201) 6548807-6570246 protein_coding
ENSDART00000121729 (vasa-202) 6549299-6569606 protein_coding
ENSDART00000125262 (vasa-203) 6548807-6570246 protein_coding
ENSDART00000128866 (vasa-204) 6548807-6570246 protein_coding
ENSDART00000148772 (vasa-003) 6548809-6570246 protein_coding
ENSDART00000149095 (vasa-002) 6548795-6569928 protein_coding
ENSDART00000149334 (vasa-001) 6548824-6570246 protein_coding
ENSDARG00000032769 (slc38a9)
solute carrier family 38, member 9
ENSDART00000041068 (slc38a9-201) 6572387-6609192 protein_coding
CIL_0001YR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021758-ENSMUSG00000047789 CGP 10090 13:112598333-112738743
GeneTranscriptPositionBiotype
ENSMUSG00000021758 (Ddx4)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
ENSMUST00000075748 (Ddx4-201) 112598333-112652310 protein_coding
ENSMUST00000099166 (Ddx4-202) 112598333-112652310 protein_coding
ENSMUSG00000047789 (Slc38a9)
solute carrier family 38, member 9
ENSMUST00000052514 (Slc38a9-201) 112660766-112738743 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YR_0001ENSDARG00000014373ENSDART00000105384ENSDART00000121729ENSDART00000125262ENSDART00000128866ENSDART00000148772ENSDART00000149095ENSDART00000149334ENSDARG00000032769ENSDART00000041068CIL_0001YR_0002ENSMUSG00000021758ENSMUST00000075748ENSMUST00000099166ENSMUSG00000047789ENSMUST00000052514
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YR_0001ENSDARG00000014373ENSDART00000105384ENSDART00000121729ENSDART00000148772ENSDART00000149095ENSDART00000149334ENSDARG00000032769ENSDART00000041068CIL_0001YR_0002ENSMUSG00000021758ENSMUST00000075748ENSMUST00000099166ENSMUSG00000047789ENSMUST00000052514
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014373 ENSDART00000105384 N/A N/A N/A 0.269±0.05 N/A N/A 0.130±0.00 10.825±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000121729 N/A N/A N/A 0.181±0.15 N/A N/A 0.074±0.00 N/A N/A N/A 0.032±0.00 N/A N/A N/A
ENSDART00000125262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000128866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148772 N/A N/A N/A N/A N/A N/A N/A 7.185±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000149095 N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149334 N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A 0.371±0.00 N/A N/A N/A N/A N/A
ENSDARG00000032769 ENSDART00000041068 N/A N/A N/A 1.425±0.54 N/A N/A 5.021±3.68 5.891±0.00 1.175±0.00 N/A 2.675±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021758 ENSMUST00000075748 0.047±0.01 0.176±0.11 0.081±0.00 0.115±0.00 0.068±0.02 0.051±0.00 0.036±0.02 0.054±0.02 0.145±0.11 0.036±0.01 0.027±0.01 0.226±0.07 N/A N/A
ENSMUST00000099166 N/A 0.055±0.02 N/A 0.308±0.13 0.007±0.00 0.008±0.00 N/A N/A 0.107±0.07 0.004±0.00 0.036±0.00 0.564±0.30 0.633±0.17 78.482±13.93
ENSMUSG00000047789 ENSMUST00000052514 1.381±0.40 1.439±0.82 2.465±0.50 1.295±0.26 0.859±0.35 0.668±0.28 1.030±0.11 1.150±0.15 1.783±0.84 0.751±0.17 0.806±0.37 1.563±0.72 1.115±0.68 4.638±2.57

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