C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00021B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052851-ENSDARG00000059817 CGP 7955 5:42701116-42742823
GeneTranscriptPositionBiotype
ENSDARG00000052851 (golph3)
golgi phosphoprotein 3 		ENSDART00000051070 (golph3-001) 42701116-42722165 protein_coding
ENSDART00000074781 (golph3-002) 42701116-42722226 protein_coding
ENSDARG00000059817 (mtmr12)
myotubularin related protein 12 		ENSDART00000083561 (mtmr12-001) 42724184-42742823 protein_coding
CIL_00021B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113384-ENSG00000150712 CGP 9606 5:32124704-32313009
GeneTranscriptPositionBiotype
ENSG00000113384 (GOLPH3)
golgi phosphoprotein 3 (coat-protein) 		ENST00000265070 (GOLPH3-001) 32124704-32174350 protein_coding
ENST00000503610 (GOLPH3-004) 32126367-32174302 nonsense_mediated_decay
ENST00000512668 (GOLPH3-003) 32126595-32174317 processed_transcript
ENSG00000150712 (MTMR12)
myotubularin related protein 12 		ENST00000264934 (MTMR12-002) 32229608-32312969 protein_coding
ENST00000280285 (MTMR12-003) 32226994-32312938 protein_coding
ENST00000382142 (MTMR12-001) 32227006-32313009 protein_coding
ENST00000504049 (MTMR12-006) 32243521-32255937 retained_intron
ENST00000505419 (MTMR12-004) 32268701-32312987 nonsense_mediated_decay
ENST00000510216 (MTMR12-007) 32230085-32233893 processed_transcript
ENST00000513622 (MTMR12-005) 32271833-32312924 nonsense_mediated_decay
ENSG00000199731 (RNU6-1079P)
RNA, U6 small nuclear 1079, pseudogene 		ENST00000362861 (RNU6-1079P-201) 32234766-32234875 snRNA
ENSG00000200065 (Y_RNA)
Y RNA 		ENST00000363195 (Y_RNA.1-308) 32134738-32134834 misc_RNA
ENSG00000207052 (RNU6-378P)
RNA, U6 small nuclear 378, pseudogene 		ENST00000384324 (RNU6-378P-201) 32309662-32309768 snRNA
ENSG00000230829 (CTD-2186M15.1)
 ENST00000477507 (CTD-2186M15.1-001) 32221932-32222347 processed_pseudogene
ENSG00000272086 (CTD-2186M15.3)
 ENST00000606994 (CTD-2186M15.3-001) 32174471-32175272 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00021B_0001ENSDARG00000052851ENSDART00000051070ENSDART00000074781ENSDARG00000059817ENSDART00000083561CIL_00021B_0002ENSG00000113384ENST00000265070ENST00000503610ENST00000512668ENSG00000150712ENST00000264934ENST00000280285ENST00000382142ENST00000504049ENST00000505419ENST00000510216ENST00000513622ENSG00000199731ENST00000362861ENSG00000200065ENST00000363195ENSG00000207052ENST00000384324ENSG00000230829ENST00000477507ENSG00000272086ENST00000606994
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00021B_0001ENSDARG00000052851ENSDART00000051070ENSDART00000074781ENSDARG00000059817ENSDART00000083561CIL_00021B_0002ENSG00000113384ENST00000265070ENST00000503610ENSG00000150712ENST00000264934ENST00000280285ENST00000382142ENST00000505419ENSG00000199731ENST00000362861ENSG00000200065ENST00000363195ENSG00000207052ENST00000384324ENSG00000230829ENST00000477507ENSG00000272086ENST00000606994
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052851 ENSDART00000051070 N/A N/A N/A 15.306±5.29 N/A N/A 5.872±1.43 5.939±0.97 2.737±0.00 N/A 4.573±0.00 N/A N/A N/A
ENSDART00000074781 N/A N/A N/A 18.252±1.17 N/A N/A 2.958±1.87 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000059817 ENSDART00000083561 N/A N/A N/A 0.818±0.31 N/A N/A 1.472±1.12 1.782±0.00 0.373±0.00 N/A 1.534±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113384 ENST00000265070 26.026±0.00 21.454±0.00 5.359±0.00 9.377±2.51 13.016±0.15 23.725±12.54 12.128±8.84 22.202±12.90 27.126±17.87 9.577±3.59 4.635±1.16 31.605±13.94 32.510±4.94 24.261±4.73
ENST00000503610 N/A N/A N/A 9.584±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000150712 ENST00000264934 N/A N/A 0.683±0.00 N/A N/A N/A N/A N/A N/A N/A 0.743±0.00 N/A N/A 3.978±0.00
ENST00000280285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.574±0.00
ENST00000382142 9.617±0.00 2.253±0.00 0.955±0.00 4.028±0.63 7.496±5.49 4.082±0.66 2.129±1.31 3.829±2.00 1.922±0.68 N/A 0.927±0.41 5.227±1.70 3.242±0.24 6.407±0.50
ENST00000504049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.419±0.00 N/A N/A N/A
ENST00000510216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199731 ENST00000362861 N/A 1.495±0.00 N/A N/A N/A 0.520±0.00 N/A N/A N/A N/A N/A N/A N/A 0.166±0.00
ENSG00000200065 ENST00000363195 N/A N/A N/A 0.772±0.00 0.185±0.00 N/A 0.882±0.00 N/A N/A 0.331±0.00 N/A N/A N/A N/A
ENSG00000207052 ENST00000384324 0.803±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230829 ENST00000477507 N/A 0.260±0.00 N/A 0.077±0.00 0.074±0.00 0.173±0.00 0.034±0.00 N/A 0.099±0.00 N/A 0.590±0.00 N/A N/A 0.126±0.04
ENSG00000272086 ENST00000606994 2.216±0.00 2.327±0.00 0.296±0.00 4.244±0.00 1.999±1.83 1.438±0.13 1.153±0.11 2.916±0.49 1.145±0.93 1.255±1.11 1.833±0.11 3.416±1.22 2.238±0.35 4.825±2.27

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