C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi phosphoprotein 3 (coat-protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265070 GOLPH3-001 ENSG00000113384 9606 - 5:32124704-32174350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265070
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265070 26.026±0.00 21.454±0.00 5.359±0.00 9.377±2.51 13.016±0.15 23.725±12.54 12.128±8.84 22.202±12.90 27.126±17.87 9.577±3.59 4.635±1.16 31.605±13.94 32.510±4.94 24.261±4.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021E CIL_00021E_0002 CGP 5:31639410-32174350
CIL_00021B CIL_00021B_0002 CGP 5:32124704-32313009

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IMP Golgi membrane
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0005802 IDA trans-Golgi network
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0007030 IMP Golgi organization
GO:0008283 IMP cell proliferation
GO:0009101 IMP glycoprotein biosynthetic process
GO:0009306 IMP protein secretion
GO:0010467 IMP gene expression
GO:0010821 IDA regulation of mitochondrion organization
GO:0016477 IMP cell migration
GO:0019899 IPI enzyme binding
GO:0030032 IMP lamellipodium assembly
GO:0031985 IDA Golgi cisterna
GO:0032008 IMP positive regulation of TOR signaling
GO:0043001 IMP Golgi to plasma membrane protein transport
GO:0045053 IMP protein retention in Golgi apparatus
GO:0048194 IMP Golgi vesicle budding
GO:0050714 IMP positive regulation of protein secretion
GO:0050901 IMP leukocyte tethering or rolling
GO:0060352 IMP cell adhesion molecule production
GO:0070273 IDA phosphatidylinositol-4-phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059680 Golph3-201 protein_coding Mus_musculus 0 2540
ENSMUST00000180521 1810049J17Rik-201 protein_coding Mus_musculus 0 366

Loading