C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00021L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061752-ENSDARG00000061752 CGP 7955 19:32828257-32931650
GeneTranscriptPositionBiotype
ENSDARG00000035957 (gmnn)
geminin, DNA replication inhibitor 		ENSDART00000052185 (gmnn-001) 32830739-32836176 protein_coding
ENSDART00000132182 (gmnn-002) 32831315-32835963 protein_coding
ENSDART00000150910 (gmnn-004) 32833144-32834048 retained_intron
ENSDART00000151536 (gmnn-003) 32833329-32835889 nonsense_mediated_decay
ENSDARG00000061752 (fam65b)
family with sequence similarity 65, member B 		ENSDART00000088427 (fam65b-201) 32828257-32889636 protein_coding
ENSDART00000131721 (fam65b-001) 32838851-32931650 protein_coding
ENSDARG00000093406 (C19H6orf62)
chromosome 6 open reading frame 62 		ENSDART00000052183 (C19H6orf62-001) 32824789-32829842 protein_coding
ENSDART00000151167 (C19H6orf62-002) 32828650-32829799 processed_transcript
CIL_00021L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036006-ENSMUSG00000006715 CGP 10090 13:24582189-24761923
GeneTranscriptPositionBiotype
ENSMUSG00000006715 (Gmnn)
geminin 		ENSMUST00000006898 (Gmnn-002) 24751845-24761861 protein_coding
ENSMUST00000110382 (Gmnn-001) 24751845-24761923 protein_coding
ENSMUST00000175689 (Gmnn-003) 24752091-24761476 protein_coding
ENSMUST00000176890 (Gmnn-005) 24752188-24761440 protein_coding
ENSMUST00000177253 (Gmnn-004) 24753706-24761897 nonsense_mediated_decay
ENSMUSG00000036006 (Fam65b)
family with sequence similarity 65, member B 		ENSMUST00000038477 (Fam65b-007) 24638696-24706001 protein_coding
ENSMUST00000058009 (Fam65b-009) 24638684-24697500 protein_coding
ENSMUST00000091694 (Fam65b-002) 24614610-24706001 protein_coding
ENSMUST00000110383 (Fam65b-006) 24582189-24733816 protein_coding
ENSMUST00000110384 (Fam65b-003) 24638648-24733816 protein_coding
ENSMUST00000132689 (Fam65b-001) 24614627-24705897 nonsense_mediated_decay
ENSMUST00000134370 (Fam65b-005) 24614610-24702162 retained_intron
ENSMUST00000138547 (Fam65b-008) 24638713-24695725 retained_intron
ENSMUST00000175986 (Fam65b-010) 24687800-24694059 retained_intron
ENSMUST00000176303 (Fam65b-013) 24672939-24678019 retained_intron
ENSMUST00000177174 (Fam65b-012) 24675472-24678015 retained_intron
ENSMUST00000177298 (Fam65b-011) 24638650-24672005 retained_intron
ENSMUST00000177489 (Fam65b-014) 24710063-24715684 retained_intron
ENSMUSG00000085603 (Gm11346)
predicted gene 11346 		ENSMUST00000118346 (Gm11346-001) 24598349-24599052 transcribed_processed_pseudogene
ENSMUST00000127863 (Gm11346-004) 24598890-24604696 processed_transcript
ENSMUST00000135889 (Gm11346-003) 24597613-24604925 retained_intron
ENSMUST00000149751 (Gm11346-002) 24598793-24604755 processed_transcript
ENSMUSG00000085861 (1700016G14Rik)
RIKEN cDNA 1700016G14 gene 		ENSMUST00000136906 (1700016G14Rik-001) 24741232-24746592 antisense
ENSMUSG00000097838 (C530050E15Rik)
RIKEN cDNA C530050E15 gene 		ENSMUST00000181373 (C530050E15Rik-201) 24631918-24638567 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00021L_0001ENSDARG00000035957ENSDART00000052185ENSDART00000132182ENSDART00000150910ENSDART00000151536ENSDARG00000061752ENSDART00000088427ENSDART00000131721ENSDARG00000093406ENSDART00000052183ENSDART00000151167CIL_00021L_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00021L_0001ENSDARG00000035957ENSDART00000052185ENSDARG00000061752ENSDART00000088427ENSDART00000131721ENSDARG00000093406ENSDART00000052183CIL_00021L_0002ENSMUSG00000006715ENSMUST00000006898ENSMUST00000110382ENSMUST00000175689ENSMUST00000176890ENSMUST00000177253ENSMUSG00000036006ENSMUST00000038477ENSMUST00000058009ENSMUST00000091694ENSMUST00000110383ENSMUST00000110384ENSMUST00000132689ENSMUST00000134370ENSMUST00000138547ENSMUST00000177298ENSMUSG00000085603ENSMUST00000118346ENSMUST00000127863ENSMUST00000135889ENSMUST00000149751ENSMUSG00000085861ENSMUST00000136906ENSMUSG00000097838ENSMUST00000181373
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035957 ENSDART00000052185 N/A N/A N/A N/A N/A N/A N/A 144.424±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000132182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000061752 ENSDART00000088427 N/A N/A N/A 3.450±0.93 N/A N/A 0.555±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000131721 N/A N/A N/A 10.353±3.47 N/A N/A N/A N/A N/A N/A 3.801±0.00 N/A N/A N/A
ENSDARG00000093406 ENSDART00000052183 N/A N/A N/A 64.691±12.90 N/A N/A 31.870±10.37 27.298±2.13 6.767±0.00 N/A 23.859±0.00 N/A N/A N/A
ENSDART00000151167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006715 ENSMUST00000006898 0.583±0.00 0.560±0.18 N/A N/A 0.142±0.00 0.323±0.02 N/A N/A 0.238±0.00 N/A N/A 0.670±0.32 N/A 10.784±0.72
ENSMUST00000110382 1.085±0.46 0.376±0.09 4.050±0.61 5.192±3.89 1.196±0.48 3.301±0.96 6.321±1.46 3.981±0.94 32.300±37.58 2.236±0.25 2.517±0.49 3.432±4.91 42.833±22.72 8.828±7.18
ENSMUST00000175689 0.205±0.04 0.544±0.00 N/A 1.913±0.00 0.302±0.00 N/A 1.581±0.27 N/A N/A 0.650±0.00 0.816±0.16 7.905±5.90 76.161±52.79 34.873±0.00
ENSMUST00000176890 N/A 0.863±0.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177253 N/A N/A N/A N/A 0.663±0.00 1.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036006 ENSMUST00000038477 N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A N/A N/A N/A
ENSMUST00000058009 N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000091694 1.300±1.00 0.196±0.00 0.188±0.05 N/A 6.181±1.27 0.286±0.06 0.619±0.21 0.614±0.04 0.600±0.38 1.631±0.25 0.425±0.03 1.038±0.26 0.458±0.23 N/A
ENSMUST00000110383 N/A 0.316±0.00 N/A N/A N/A N/A N/A N/A 0.567±0.25 N/A 0.391±0.00 N/A N/A N/A
ENSMUST00000110384 6.448±0.26 0.247±0.04 N/A 9.325±1.76 5.304±3.42 0.346±0.00 N/A 0.394±0.00 0.678±0.22 1.108±0.34 0.527±0.16 2.084±0.78 0.339±0.00 0.485±0.00
ENSMUST00000132689 N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134370 N/A 0.236±0.05 N/A N/A N/A 0.233±0.00 N/A 0.645±0.00 0.224±0.00 N/A N/A 0.848±0.00 N/A N/A
ENSMUST00000138547 N/A N/A N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A 2.368±0.02 N/A
ENSMUST00000175986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177298 N/A 0.911±0.12 N/A N/A N/A 0.634±0.11 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085603 ENSMUST00000118346 N/A N/A N/A N/A N/A 0.198±0.00 0.233±0.00 N/A 0.084±0.03 N/A 0.148±0.00 0.194±0.08 0.127±0.00 0.269±0.00
ENSMUST00000127863 0.122±0.00 N/A 0.068±0.00 N/A N/A 0.354±0.00 N/A 0.132±0.00 0.113±0.02 N/A N/A 0.239±0.03 0.719±0.62 0.296±0.11
ENSMUST00000135889 0.141±0.07 0.044±0.02 0.051±0.00 0.252±0.01 0.924±0.50 0.080±0.05 0.084±0.04 0.130±0.10 0.062±0.04 0.321±0.12 0.020±0.01 0.280±0.17 0.087±0.09 0.072±0.01
ENSMUST00000149751 N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A 0.398±0.09
ENSMUSG00000085861 ENSMUST00000136906 N/A N/A 0.010±0.00 0.050±0.02 0.066±0.00 0.098±0.00 0.043±0.00 0.086±0.03 0.184±0.11 N/A N/A 0.089±0.00 0.171±0.09 42.098±12.32
ENSMUSG00000097838 ENSMUST00000181373 0.199±0.18 0.089±0.03 0.033±0.00 0.307±0.08 0.468±0.15 0.067±0.01 0.065±0.03 0.065±0.02 0.045±0.01 0.218±0.06 0.124±0.01 0.107±0.08 0.031±0.04 0.004±0.00

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