C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: geminin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110382 Gmnn-001 ENSMUSG00000006715 10090 - 13:24751845-24761923 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110382
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110382 1.085±0.46 0.376±0.09 4.050±0.61 5.192±3.89 1.196±0.48 3.301±0.96 6.321±1.46 3.981±0.94 32.300±37.58 2.236±0.25 2.517±0.49 3.432±4.91 42.833±22.72 8.828±7.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021L CIL_00021L_0002 CGP 13:24582189-24761923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 ISS cytoplasm
GO:0006461 IDA protein complex assembly
GO:0007049 IEA cell cycle
GO:0008156 IEA:IDA negative regulation of DNA replication
GO:0009887 IDA organ morphogenesis
GO:0042826 ISS histone deacetylase binding
GO:0045786 IEA:IDA negative regulation of cell cycle
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0070491 IPI repressing transcription factor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230056 GMNN-001 protein_coding Homo_sapiens 0 547
ENST00000356509 GMNN-002 protein_coding Homo_sapiens 0 547
ENST00000378054 GMNN-003 protein_coding Homo_sapiens 0 475
ENST00000620958 GMNN-201 protein_coding Homo_sapiens 0 547

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