C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000237_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204740-ENSG00000120594 CGP 9606 10:19048771-20289856
GeneTranscriptPositionBiotype
ENSG00000120594 (PLXDC2)
plexin domain containing 2 		ENST00000377238 (PLXDC2-003) 20043320-20280357 processed_transcript
ENST00000377242 (PLXDC2-002) 19816239-20280357 protein_coding
ENST00000377252 (PLXDC2-001) 19816239-20289856 protein_coding
ENSG00000204740 (MALRD1)
MAM and LDL receptor class A domain containing 1 		ENST00000377265 (MALRD1-002) 19489094-19734476 protein_coding
ENST00000377266 (MALRD1-001) 19203850-19734237 protein_coding
ENST00000418367 (MALRD1-005) 19730574-19734478 protein_coding
ENST00000441070 (MALRD1-004) 19352168-19491572 protein_coding
ENST00000454679 (MALRD1-201) 19048771-19734478 protein_coding
ENST00000480707 (MALRD1-006) 19692310-19790401 processed_transcript
ENST00000492202 (MALRD1-003) 19488595-19531302 processed_transcript
ENSG00000226255 (UBE2V2P1)
ubiquitin-conjugating enzyme E2 variant 2 pseudogene 1 		ENST00000434717 (UBE2V2P1-001) 19051455-19052170 processed_pseudogene
ENSG00000227734 (RP11-49L2.1)
 ENST00000426818 (RP11-49L2.1-001) 19290223-19291480 antisense
ENSG00000230818 (MTND2P16)
MT-ND2 pseudogene 16 		ENST00000419987 (MTND2P16-001) 19747823-19748621 processed_pseudogene
ENSG00000233968 (RP11-354E11.2)
 ENST00000423551 (RP11-354E11.2-003) 19721978-19728550 antisense
ENST00000431157 (RP11-354E11.2-002) 19721588-19728550 antisense
ENST00000451713 (RP11-354E11.2-001) 19710328-19728550 antisense
ENSG00000236960 (RP11-265G8.3)
 ENST00000427935 (RP11-265G8.3-001) 19491072-19491299 processed_pseudogene
ENSG00000238246 (RP11-575A19.2)
 ENST00000451584 (RP11-575A19.2-001) 20070805-20091784 antisense
ENSG00000252001 (RNA5SP303)
RNA, 5S ribosomal pseudogene 303 		ENST00000516192 (RNA5SP303-201) 19633683-19633812 rRNA
CIL_000237_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075520-ENSMUSG00000026748 CGP 10090 2:16042126-16755839
GeneTranscriptPositionBiotype
ENSMUSG00000026748 (Plxdc2)
plexin domain containing 2 		ENSMUST00000028081 (Plxdc2-001) 16356304-16755839 protein_coding
ENSMUST00000114702 (Plxdc2-002) 16357117-16751857 protein_coding
ENSMUST00000114703 (Plxdc2-003) 16356887-16751689 protein_coding
ENSMUST00000126173 (Plxdc2-004) 16638696-16751690 processed_transcript
ENSMUSG00000075520 (Malrd1)
MAM and LDL receptor class A domain containing 1 		ENSMUST00000146205 (Malrd1-001) 16042126-16150806 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000237_0001ENSG00000120594ENST00000377238ENST00000377242ENST00000377252ENSG00000204740ENST00000377265ENST00000377266ENST00000418367ENST00000441070ENST00000454679ENST00000480707ENST00000492202ENSG00000226255ENST00000434717ENSG00000227734ENST00000426818ENSG00000230818ENST00000419987ENSG00000233968ENST00000423551ENST00000431157ENST00000451713ENSG00000236960ENST00000427935ENSG00000238246ENST00000451584ENSG00000252001ENST00000516192CIL_000237_0002ENSMUSG00000026748ENSMUST00000028081ENSMUST00000114702ENSMUST00000114703ENSMUST00000126173ENSMUSG00000075520ENSMUST00000146205
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000237_0001ENSG00000120594ENST00000377238ENST00000377242ENST00000377252ENSG00000204740ENST00000377265ENST00000377266ENST00000418367ENST00000454679ENST00000480707ENST00000492202ENSG00000226255ENST00000434717ENSG00000227734ENST00000426818ENSG00000230818ENST00000419987ENSG00000233968ENST00000423551ENST00000431157ENST00000451713ENSG00000236960ENST00000427935ENSG00000238246ENST00000451584ENSG00000252001ENST00000516192CIL_000237_0002ENSMUSG00000026748ENSMUST00000028081ENSMUST00000114702ENSMUST00000114703ENSMUST00000126173ENSMUSG00000075520ENSMUST00000146205
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120594 ENST00000377238 N/A N/A 3.607±0.00 2.749±0.00 9.495±0.00 N/A N/A 0.715±0.00 0.673±0.00 10.130±0.00 N/A 3.400±0.00 1.312±0.58 N/A
ENST00000377242 N/A N/A 3.196±0.00 3.346±0.00 N/A N/A 3.008±0.00 1.072±0.00 7.672±0.00 8.406±0.98 0.975±0.00 4.275±0.42 3.601±2.40 4.401±0.00
ENST00000377252 12.460±0.00 2.063±0.00 1.306±0.00 2.610±0.82 3.360±0.00 4.026±1.50 1.794±0.94 1.698±0.97 2.513±1.97 6.514±0.40 1.246±1.16 2.794±0.93 1.049±0.32 3.427±1.59
ENSG00000204740 ENST00000377265 N/A 0.018±0.00 0.560±0.00 0.166±0.00 0.268±0.08 0.142±0.00 0.133±0.03 0.472±0.00 0.233±0.00 0.153±0.09 N/A 0.309±0.11 0.150±0.09 0.485±0.10
ENST00000377266 N/A N/A N/A 0.039±0.00 N/A 0.026±0.00 N/A N/A N/A 0.208±0.00 N/A N/A N/A N/A
ENST00000418367 N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454679 N/A N/A N/A 0.005±0.00 N/A 0.033±0.00 N/A N/A 0.035±0.00 N/A N/A 0.018±0.00 0.028±0.00 0.264±0.10
ENST00000480707 N/A N/A N/A N/A N/A N/A N/A 1.519±0.00 N/A N/A N/A N/A N/A N/A
ENST00000492202 0.073±0.00 0.082±0.00 N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A N/A
ENSG00000226255 ENST00000434717 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.026±0.00 N/A N/A N/A N/A 0.107±0.00
ENSG00000227734 ENST00000426818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00
ENSG00000230818 ENST00000419987 0.014±0.00 0.013±0.00 0.374±0.00 0.014±0.00 N/A N/A 0.025±0.00 0.013±0.00 N/A N/A N/A N/A N/A 0.037±0.03
ENSG00000233968 ENST00000423551 0.055±0.00 0.112±0.00 N/A 0.096±0.00 0.120±0.00 N/A 0.094±0.08 N/A N/A N/A 0.016±0.00 N/A N/A 0.149±0.00
ENST00000431157 N/A N/A N/A N/A 0.226±0.15 N/A N/A 0.086±0.00 0.220±0.00 N/A N/A 0.068±0.00 0.091±0.02 0.139±0.00
ENST00000451713 N/A 0.024±0.00 0.128±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00
ENSG00000236960 ENST00000427935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A
ENSG00000238246 ENST00000451584 0.218±0.00 0.130±0.00 N/A 0.237±0.00 2.080±0.98 0.112±0.00 0.164±0.04 0.271±0.00 N/A 0.376±0.00 0.235±0.00 0.267±0.18 0.048±0.00 0.209±0.07
ENSG00000252001 ENST00000516192 N/A N/A N/A 26.691±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026748 ENSMUST00000028081 2.740±0.56 1.089±0.67 6.499±1.64 1.168±0.48 3.019±1.13 0.759±0.11 1.777±0.27 5.349±1.16 0.086±0.06 18.531±1.48 0.594±0.09 9.165±1.94 0.441±0.26 0.249±0.10
ENSMUST00000114702 N/A N/A 8.185±0.73 3.209±2.55 6.578±3.87 0.628±0.16 2.403±0.35 5.738±1.31 0.303±0.07 9.346±0.00 1.246±0.48 15.342±11.36 1.386±1.01 0.401±0.21
ENSMUST00000114703 N/A N/A N/A N/A 2.169±0.00 N/A N/A 4.199±0.53 0.179±0.00 7.155±0.00 0.592±0.07 7.120±1.43 0.429±0.12 0.215±0.05
ENSMUST00000126173 4.694±1.34 1.233±0.10 12.147±1.90 N/A 5.249±1.62 N/A N/A 6.158±0.00 0.153±0.16 N/A 1.104±0.19 8.644±0.83 N/A N/A
ENSMUSG00000075520 ENSMUST00000146205 N/A N/A N/A 0.076±0.00 N/A 0.619±0.43 N/A 1.719±0.86 0.051±0.00 N/A N/A 0.040±0.00 0.048±0.03 0.160±0.08

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