C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000240_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000243156-ENSG00000215193 CGP 9606 22:17787649-18131138
GeneTranscriptPositionBiotype
ENSG00000093100 (XXbac-B461K10.4)
 ENST00000476405 (XXbac-B461K10.4-002) 17787652-17811497 retained_intron
ENSG00000207780 (MIR648)
microRNA 648 		ENST00000385046 (MIR648-201) 17980868-17980961 miRNA
ENSG00000215193 (PEX26)
peroxisomal biogenesis factor 26 		ENST00000329627 (PEX26-001) 18077923-18105396 protein_coding
ENST00000399744 (PEX26-002) 18078008-18088460 protein_coding
ENST00000428061 (PEX26-003) 18078377-18088119 protein_coding
ENST00000474897 (PEX26-004) 18078015-18131138 nonsense_mediated_decay
ENST00000610387 (PEX26-201) 18077920-18091019 protein_coding
ENST00000618979 (PEX26-202) 18077994-18091030 protein_coding
ENSG00000234913 (XXbac-B476C20.13)
 ENST00000441167 (XXbac-B476C20.13-001) 18004270-18007308 sense_intronic
ENSG00000235295 (FLJ41941)
uncharacterized LOC100192420 		ENST00000443243 (FLJ41941-001) 18029385-18037968 lincRNA
ENSG00000235445 (XXbac-B476C20.14)
 ENST00000429618 (XXbac-B476C20.14-001) 17983205-17983619 sense_intronic
ENSG00000236890 (XXbac-B476C20.11)
 ENST00000427227 (XXbac-B476C20.11-001) 18081466-18081675 processed_pseudogene
ENSG00000237446 (RHEBP3)
Ras-homolog enriched in brain pseudogene 3 		ENST00000411920 (RHEBP3-001) 18019214-18020200 processed_pseudogene
ENSG00000280007 (AC008079.10)
 ENST00000623543 (AC008079.10-001) 18110759-18131154 antisense
CIL_000240_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003178-ENSMUSG00000067825 CGP 10090 6:121007241-121198837
GeneTranscriptPositionBiotype
ENSMUSG00000003178 (Mical3)
microtubule associated monooxygenase, calponin and LIM domain containing 3 		ENSMUST00000077159 (Mical3-201) 121007241-121081609 protein_coding
ENSMUSG00000067825 (Pex26)
peroxisomal biogenesis factor 26 		ENSMUST00000088561 (Pex26-001) 121183667-121196192 protein_coding
ENSMUST00000118234 (Pex26-003) 121183667-121196185 protein_coding
ENSMUST00000120066 (Pex26-002) 121183889-121196185 protein_coding
ENSMUST00000125633 (Pex26-004) 121183898-121198837 nonsense_mediated_decay
ENSMUST00000137432 (Pex26-006) 121183802-121187441 protein_coding
ENSMUST00000139393 (Pex26-005) 121183898-121187081 retained_intron
ENSMUSG00000097011 (Gm4651)
predicted gene 4651 		ENSMUST00000181738 (Gm4651-201) 121064464-121069954 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000240_0001ENSG00000093100ENST00000476405ENSG00000207780ENST00000385046ENSG00000215193ENST00000329627ENST00000399744ENST00000428061ENST00000474897ENST00000610387ENST00000618979ENSG00000234913ENST00000441167ENSG00000235295ENST00000443243ENSG00000235445ENST00000429618ENSG00000236890ENST00000427227ENSG00000237446ENST00000411920ENSG00000280007ENST00000623543CIL_000240_0002ENSMUSG00000003178ENSMUST00000077159ENSMUSG00000067825ENSMUST00000088561ENSMUST00000118234ENSMUST00000120066ENSMUST00000125633ENSMUST00000137432ENSMUST00000139393ENSMUSG00000097011ENSMUST00000181738
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000240_0001ENSG00000093100ENST00000476405ENSG00000207780ENST00000385046ENSG00000215193ENST00000329627ENST00000399744ENST00000610387ENST00000618979ENSG00000234913ENST00000441167ENSG00000235295ENST00000443243ENSG00000235445ENST00000429618ENSG00000236890ENST00000427227ENSG00000237446ENST00000411920ENSG00000280007ENST00000623543CIL_000240_0002ENSMUSG00000003178ENSMUST00000077159ENSMUSG00000067825ENSMUST00000088561ENSMUST00000118234ENSMUST00000120066ENSMUST00000125633ENSMUST00000139393ENSMUSG00000097011ENSMUST00000181738
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000093100 ENST00000476405 1.887±0.00 8.641±0.00 N/A N/A 3.808±1.29 N/A N/A 2.200±0.00 6.011±0.00 1.737±0.57 0.825±0.00 9.233±1.81 1.748±0.44 3.778±0.00
ENSG00000207780 ENST00000385046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.499±0.00 N/A 1.407±0.00
ENSG00000215193 ENST00000329627 0.922±0.00 1.307±0.00 0.206±0.00 1.568±0.00 1.333±0.00 0.816±0.00 0.446±0.26 0.853±0.46 0.418±0.27 0.408±0.24 0.860±0.00 0.973±0.05 0.440±0.12 0.708±0.14
ENST00000399744 N/A N/A N/A 2.334±0.00 N/A N/A N/A 1.775±0.00 N/A 1.112±0.00 N/A N/A N/A N/A
ENST00000428061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610387 3.056±0.00 3.300±0.00 N/A N/A N/A 3.073±0.44 N/A 4.272±0.00 3.101±2.08 N/A 3.892±0.00 2.117±0.25 2.382±0.00 3.171±0.00
ENST00000618979 4.333±0.00 4.302±0.00 0.868±0.00 4.229±2.47 3.849±2.23 1.518±0.00 4.177±0.00 2.977±2.26 4.673±0.00 2.765±2.31 N/A 4.535±0.16 3.473±1.25 2.765±0.27
ENSG00000234913 ENST00000441167 0.041±0.00 0.158±0.00 0.277±0.00 0.085±0.01 0.276±0.24 0.157±0.10 0.113±0.00 0.157±0.04 0.138±0.12 0.107±0.09 0.042±0.00 0.119±0.10 0.040±0.00 0.122±0.09
ENSG00000235295 ENST00000443243 0.052±0.00 0.156±0.00 N/A 0.050±0.01 0.303±0.17 0.042±0.00 0.024±0.00 0.074±0.00 0.113±0.10 0.045±0.01 1.735±1.42 0.017±0.01 0.041±0.00 0.104±0.06
ENSG00000235445 ENST00000429618 N/A 0.333±0.00 N/A 0.476±0.37 0.388±0.00 0.163±0.03 0.355±0.21 0.100±0.00 0.090±0.00 N/A N/A 0.178±0.00 N/A 0.066±0.02
ENSG00000236890 ENST00000427227 N/A 0.819±0.00 N/A N/A N/A N/A 0.294±0.00 2.515±0.00 N/A N/A N/A 1.821±0.18 N/A 0.545±0.00
ENSG00000237446 ENST00000411920 N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A 0.065±0.00
ENSG00000280007 ENST00000623543 0.276±0.00 0.432±0.00 0.073±0.00 0.904±0.66 0.338±0.22 0.197±0.00 1.560±1.02 N/A 0.090±0.00 0.117±0.00 1.674±0.30 N/A N/A 1.405±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003178 ENSMUST00000077159 4.130±0.00 N/A N/A N/A 2.855±1.70 1.634±1.21 N/A 2.283±0.32 1.432±0.00 1.147±0.00 N/A 7.810±3.06 5.086±2.25 59.344±15.65
ENSMUSG00000067825 ENSMUST00000088561 4.621±2.06 3.424±0.67 4.357±0.79 4.333±0.78 2.985±0.84 4.613±3.01 2.507±0.60 5.847±0.48 3.973±1.64 3.939±0.33 1.141±0.30 6.018±2.07 3.062±0.96 2.047±0.25
ENSMUST00000118234 N/A N/A N/A N/A N/A N/A N/A N/A 0.623±0.00 N/A 0.662±0.27 2.326±1.07 1.310±0.53 0.343±0.00
ENSMUST00000120066 3.472±1.00 3.324±0.52 3.022±0.37 2.342±1.02 3.455±1.33 4.973±0.62 1.146±0.17 3.927±0.67 2.869±1.69 1.985±0.47 0.732±0.35 4.611±1.80 2.929±1.33 1.536±0.67
ENSMUST00000125633 N/A 3.669±1.23 N/A N/A 3.690±0.38 4.130±0.66 N/A N/A N/A N/A N/A 4.289±0.82 N/A N/A
ENSMUST00000137432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139393 N/A N/A N/A N/A 0.756±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00
ENSMUSG00000097011 ENSMUST00000181738 0.100±0.08 N/A 0.142±0.00 0.126±0.11 0.112±0.07 0.151±0.09 0.063±0.00 0.077±0.06 0.064±0.03 0.094±0.04 N/A 0.136±0.05 0.149±0.10 0.105±0.03

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