C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule associated monooxygenase, calponin and LIM domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077159 Mical3-201 ENSMUSG00000003178 10090 - 6:121007241-121081609 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000077159
Transcript ID Adipose Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000077159 4.130±0.00 2.855±1.70 1.634±1.21 2.283±0.32 1.432±0.00 1.147±0.00 7.810±3.06 5.086±2.25 59.344±15.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000240 CIL_000240_0002 CGP 6:121007241-121198837

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006887 IEA exocytosis
GO:0007010 ISS cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0016709 ISS oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0030042 ISS actin filament depolymerization
GO:0055114 ISS oxidation-reduction process
GO:0071949 ISS FAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000037315 mical1-201 protein_coding Danio_rerio 0.0000003 62
ENSDART00000136707 mical1-001 protein_coding Danio_rerio 0.0000003 62
ENST00000256194 MICAL2-001 protein_coding Homo_sapiens 0 627
ENST00000342902 MICAL2-201 protein_coding Homo_sapiens 0 627
ENST00000379612 MICAL2-202 protein_coding Homo_sapiens 0 627
ENST00000383094 MICAL3-001 protein_coding Homo_sapiens 0 3101
ENST00000400561 MICAL3-003 protein_coding Homo_sapiens 0 3101
ENST00000414725 MICAL3-002 protein_coding Homo_sapiens 0 2839
ENST00000424046 MICAL3-006 protein_coding Homo_sapiens 0 536
ENST00000441493 MICAL3-010 protein_coding Homo_sapiens 0 3127
ENST00000461307 MICAL3-004 protein_coding Homo_sapiens 0 965
ENST00000462645 MICAL3-008 processed_transcript Homo_sapiens 0 267
ENST00000465886 MICAL3-007 processed_transcript Homo_sapiens 3e-30 135
ENST00000495076 MICAL3-005 nonsense_mediated_decay Homo_sapiens 0 1853
ENST00000527546 MICAL2-007 protein_coding Homo_sapiens 0 627
ENST00000528931 MICAL2-006 retained_intron Homo_sapiens 0 627
ENST00000530691 MICAL2-003 retained_intron Homo_sapiens 0 412
ENST00000537344 MICAL2-203 protein_coding Homo_sapiens 0 627
ENST00000585038 MICAL3-012 protein_coding Homo_sapiens 0 2848

Loading