C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00024J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043722-ENSDARG00000010146 CGP 7955 25:16939228-16957867
GeneTranscriptPositionBiotype
ENSDARG00000010146 (cpa2)
carboxypeptidase A2 (pancreatic) 		ENSDART00000011397 (cpa2-001) 16947692-16957867 protein_coding
ENSDARG00000043722 (cpa4)
carboxypeptidase A4 		ENSDART00000064204 (cpa4-001) 16939228-16946517 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00024J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158516-ENSG00000128510 CGP 9606 7:130266827-130324180
GeneTranscriptPositionBiotype
ENSG00000128510 (CPA4)
carboxypeptidase A4 		ENST00000222482 (CPA4-001) 130293153-130324179 protein_coding
ENST00000445470 (CPA4-201) 130293134-130324180 protein_coding
ENST00000470542 (CPA4-008) 130293161-130305868 processed_transcript
ENST00000473956 (CPA4-007) 130293163-130306827 protein_coding
ENST00000474254 (CPA4-002) 130293161-130306276 retained_intron
ENST00000486598 (CPA4-006) 130293279-130304492 protein_coding
ENST00000488025 (CPA4-011) 130308132-130312122 retained_intron
ENST00000490117 (CPA4-010) 130293163-130304643 retained_intron
ENST00000492072 (CPA4-009) 130293161-130306815 protein_coding
ENST00000493259 (CPA4-003) 130293163-130323121 protein_coding
ENST00000497388 (CPA4-005) 130293161-130299654 retained_intron
ENSG00000158516 (CPA2)
carboxypeptidase A2 (pancreatic) 		ENST00000222481 (CPA2-001) 130266827-130289798 protein_coding
ENST00000416698 (CPA2-004) 130266881-130276738 nonsense_mediated_decay
ENST00000480781 (CPA2-003) 130266865-130273240 retained_intron
ENST00000487259 (CPA2-002) 130266867-130277032 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_00024J_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071553-ENSMUSG00000039070 CGP 10090 6:30541582-30592418
GeneTranscriptPositionBiotype
ENSMUSG00000039070 (Cpa4)
carboxypeptidase A4 		ENSMUST00000049251 (Cpa4-001) 30568369-30592418 protein_coding
ENSMUSG00000071553 (Cpa2)
carboxypeptidase A2, pancreatic 		ENSMUST00000096066 (Cpa2-001) 30541582-30564476 protein_coding
ENSMUST00000123588 (Cpa2-008) 30546642-30547155 processed_transcript
ENSMUST00000126426 (Cpa2-006) 30543916-30552056 retained_intron
ENSMUST00000131137 (Cpa2-003) 30541670-30547110 processed_transcript
ENSMUST00000133009 (Cpa2-002) 30541642-30544472 retained_intron
ENSMUST00000142653 (Cpa2-004) 30543208-30544992 retained_intron
ENSMUST00000144282 (Cpa2-007) 30551903-30564248 processed_transcript
ENSMUST00000146936 (Cpa2-009) 30544485-30549285 retained_intron
ENSMUST00000151684 (Cpa2-005) 30543277-30547206 processed_transcript
ENSMUSG00000086854 (Gm13781)
predicted gene 13781 		ENSMUST00000124153 (Gm13781-001) 30573153-30576035 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024J_0001ENSDARG00000010146ENSDART00000011397ENSDARG00000043722ENSDART00000064204CIL_00024J_0002ENSG00000128510ENST00000222482ENST00000445470ENST00000470542ENST00000473956ENST00000474254ENST00000486598ENST00000488025ENST00000490117ENST00000492072ENST00000493259ENST00000497388ENSG00000158516ENST00000222481ENST00000416698ENST00000480781ENST00000487259CIL_00024J_0003ENSMUSG00000039070ENSMUST00000049251ENSMUSG00000071553ENSMUST00000096066ENSMUST00000123588ENSMUST00000126426ENSMUST00000131137ENSMUST00000133009ENSMUST00000142653ENSMUST00000144282ENSMUST00000146936ENSMUST00000151684ENSMUSG00000086854ENSMUST00000124153
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024J_0001ENSDARG00000010146ENSDART00000011397ENSDARG00000043722ENSDART00000064204CIL_00024J_0002ENSG00000128510ENST00000222482ENST00000445470ENST00000473956ENST00000486598ENST00000488025ENST00000492072ENST00000493259ENSG00000158516ENST00000222481ENST00000416698ENST00000487259CIL_00024J_0003ENSMUSG00000039070ENSMUST00000049251ENSMUSG00000071553ENSMUST00000096066ENSMUST00000126426ENSMUST00000144282ENSMUST00000146936ENSMUSG00000086854ENSMUST00000124153
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010146 ENSDART00000011397 N/A N/A N/A 0.193±0.04 N/A N/A 0.200±0.15 1.997±1.80 N/A N/A 0.102±0.00 N/A N/A N/A
ENSDARG00000043722 ENSDART00000064204 N/A N/A N/A 0.084±0.03 N/A N/A 0.368±0.24 3.301±2.80 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128510 ENST00000222482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.12 1.434±1.21 0.255±0.00
ENST00000445470 0.098±0.00 0.242±0.00 N/A 0.213±0.00 0.063±0.00 0.005±0.00 0.040±0.00 0.307±0.18 N/A 0.072±0.00 0.033±0.00 N/A N/A 0.305±0.00
ENST00000470542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473956 N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A 0.129±0.00 N/A N/A
ENST00000474254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.256±0.00 N/A N/A
ENST00000488025 0.260±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A N/A
ENST00000493259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.04 N/A N/A
ENST00000497388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000158516 ENST00000222481 0.021±0.00 0.045±0.00 N/A 0.169±0.00 0.250±0.12 0.042±0.00 0.035±0.03 N/A N/A N/A N/A 0.057±0.05 0.150±0.06 0.293±0.00
ENST00000416698 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A 0.065±0.00 0.382±0.00
ENST00000480781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487259 N/A N/A N/A 0.092±0.00 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039070 ENSMUST00000049251 N/A 0.816±0.06 0.003±0.00 0.197±0.13 0.320±0.07 0.043±0.03 N/A N/A 0.033±0.00 0.917±0.31 0.024±0.01 0.010±0.00 0.147±0.13 0.050±0.02
ENSMUSG00000071553 ENSMUST00000096066 0.297±0.17 0.082±0.01 0.051±0.00 0.267±0.08 0.205±0.07 40.830±32.92 0.058±0.01 0.066±0.03 0.307±0.25 0.161±0.10 0.031±0.00 0.577±0.34 0.443±0.23 0.298±0.15
ENSMUST00000123588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126426 N/A 0.347±0.00 N/A N/A N/A 0.562±0.22 N/A N/A 0.059±0.02 0.089±0.00 0.051±0.00 0.469±0.31 0.059±0.00 N/A
ENSMUST00000131137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144282 N/A N/A 0.032±0.00 0.777±0.22 0.471±0.00 0.353±0.00 N/A N/A 0.060±0.00 N/A N/A N/A 0.345±0.00 0.524±0.00
ENSMUST00000146936 N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A
ENSMUST00000151684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086854 ENSMUST00000124153 0.223±0.00 N/A N/A 0.085±0.06 0.305±0.00 N/A N/A N/A N/A 0.154±0.00 N/A N/A 0.043±0.01 N/A

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