C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carboxypeptidase A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049251 Cpa4-001 ENSMUSG00000039070 10090 + 6:30568369-30592418 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000049251
Transcript ID Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049251 0.816±0.06 0.003±0.00 0.197±0.13 0.320±0.07 0.043±0.03 0.033±0.00 0.917±0.31 0.024±0.01 0.010±0.00 0.147±0.13 0.050±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_00024J CIL_00024J_0003 CGP 6:30541582-30592418
CIL_000275 CIL_000275_0002 CGP 6:30568369-30631745

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004181 IEA metallocarboxypeptidase activity
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222482 CPA4-001 protein_coding Homo_sapiens 0 1301
ENST00000445470 CPA4-201 protein_coding Homo_sapiens 0 274
ENST00000470542 CPA4-008 processed_transcript Homo_sapiens 0 457
ENST00000473956 CPA4-007 protein_coding Homo_sapiens 0 272
ENST00000474254 CPA4-002 retained_intron Homo_sapiens 0 274
ENST00000486598 CPA4-006 protein_coding Homo_sapiens 0 322
ENST00000490117 CPA4-010 retained_intron Homo_sapiens 0 468
ENST00000492072 CPA4-009 protein_coding Homo_sapiens 0 470
ENST00000497388 CPA4-005 retained_intron Homo_sapiens 0 276

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