C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00024Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198624-ENSG00000196743 CGP 9606 5:151181052-151270440
GeneTranscriptPositionBiotype
ENSG00000196743 (GM2A)
GM2 ganglioside activator 		ENST00000357164 (GM2A-001) 151252892-151270440 protein_coding
ENST00000523004 (GM2A-002) 151259799-151267255 protein_coding
ENST00000523466 (GM2A-004) 151212150-151266880 protein_coding
ENSG00000198624 (CCDC69)
coiled-coil domain containing 69 		ENST00000355417 (CCDC69-001) 151181052-151224145 protein_coding
ENST00000518189 (CCDC69-004) 151181393-151205477 nonsense_mediated_decay
ENST00000519448 (CCDC69-005) 151181235-151185215 retained_intron
ENST00000519740 (CCDC69-006) 151215566-151224092 nonsense_mediated_decay
ENST00000521308 (CCDC69-002) 151181052-151224093 processed_transcript
ENST00000522179 (CCDC69-007) 151205400-151211145 processed_transcript
ENST00000522964 (CCDC69-009) 151185422-151205475 nonsense_mediated_decay
ENST00000524344 (CCDC69-008) 151198842-151205475 retained_intron
CIL_00024Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049588-ENSMUSG00000000594 CGP 10090 11:55049731-55113029
GeneTranscriptPositionBiotype
ENSMUSG00000000594 (Gm2a)
GM2 ganglioside activator protein 		ENSMUST00000000608 (Gm2a-001) 55098115-55113029 protein_coding
ENSMUSG00000049588 (Ccdc69)
coiled-coil domain containing 69 		ENSMUST00000055040 (Ccdc69-001) 55049731-55078107 protein_coding
ENSMUST00000108880 (Ccdc69-002) 55050730-55078131 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024Q_0001ENSG00000196743ENST00000357164ENST00000523004ENST00000523466ENSG00000198624ENST00000355417ENST00000518189ENST00000519448ENST00000519740ENST00000521308ENST00000522179ENST00000522964ENST00000524344CIL_00024Q_0002ENSMUSG00000000594ENSMUST00000000608ENSMUSG00000049588ENSMUST00000055040ENSMUST00000108880
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024Q_0001ENSG00000196743ENST00000357164ENSG00000198624ENST00000355417ENST00000518189ENST00000519448ENST00000521308CIL_00024Q_0002ENSMUSG00000000594ENSMUST00000000608ENSMUSG00000049588ENSMUST00000055040ENSMUST00000108880
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196743 ENST00000357164 6.806±0.00 6.955±0.00 N/A 2.672±1.79 10.980±8.26 3.610±0.00 4.018±2.93 2.429±1.12 4.337±0.00 8.819±4.52 1.609±0.52 6.043±1.88 42.800±14.20 3.917±1.42
ENST00000523004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198624 ENST00000355417 36.545±0.00 26.150±0.00 N/A 2.572±2.16 26.101±23.65 28.978±26.28 37.155±34.23 4.149±1.47 16.905±2.68 30.040±25.99 17.113±6.19 11.005±9.09 16.106±2.76 5.848±0.48
ENST00000518189 N/A N/A N/A N/A N/A N/A 1.152±0.00 N/A N/A N/A N/A N/A 3.713±0.00 N/A
ENST00000519448 N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.456±0.00 N/A N/A
ENST00000519740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521308 45.446±0.00 25.436±0.00 0.687±0.00 N/A 38.028±0.00 44.171±0.00 N/A N/A 6.426±0.00 N/A N/A 8.294±0.00 N/A 10.428±0.00
ENST00000522179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000594 ENSMUST00000000608 70.846±13.89 150.543±9.62 25.299±2.43 4.390±1.27 77.621±26.14 23.382±1.30 7.664±2.12 114.502±12.81 28.097±21.71 42.008±2.24 2.330±0.44 228.772±68.78 104.912±29.32 34.061±25.10
ENSMUSG00000049588 ENSMUST00000055040 5.781±0.76 1.581±0.52 10.818±1.08 0.131±0.06 4.791±1.69 0.707±0.14 5.623±1.78 0.523±0.21 0.535±0.38 1.466±0.02 2.174±0.41 3.860±0.51 4.645±2.49 0.644±0.32
ENSMUST00000108880 N/A N/A N/A N/A N/A 0.153±0.00 N/A N/A 0.124±0.06 N/A N/A 2.796±0.00 3.343±0.00 0.219±0.04

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