C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002CY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000077327-ENSG00000150867 CGP 9606 10:22345445-22714555
GeneTranscriptPositionBiotype
ENSG00000077327 (SPAG6)
sperm associated antigen 6 		ENST00000313311 (SPAG6-005) 22345497-22417610 protein_coding
ENST00000376603 (SPAG6-201) 22345445-22417596 protein_coding
ENST00000376624 (SPAG6-004) 22345470-22417621 protein_coding
ENST00000435326 (SPAG6-007) 22345498-22386792 protein_coding
ENST00000456231 (SPAG6-006) 22345487-22401255 protein_coding
ENST00000487973 (SPAG6-002) 22391805-22454224 processed_transcript
ENST00000488555 (SPAG6-008) 22345487-22401277 processed_transcript
ENST00000490361 (SPAG6-001) 22391803-22411670 processed_transcript
ENST00000538630 (SPAG6-202) 22360822-22417609 protein_coding
ENSG00000150867 (PIP4K2A)
phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 		ENST00000323883 (PIP4K2A-006) 22536738-22591713 protein_coding
ENST00000376573 (PIP4K2A-001) 22534849-22714555 protein_coding
ENST00000422321 (PIP4K2A-002) 22567537-22609717 processed_transcript
ENST00000432610 (PIP4K2A-003) 22607818-22609717 processed_transcript
ENST00000474335 (PIP4K2A-004) 22536893-22539635 processed_transcript
ENST00000545335 (PIP4K2A-005) 22537015-22714108 protein_coding
ENST00000604912 (PIP4K2A-007) 22541952-22591675 protein_coding
ENST00000605011 (PIP4K2A-008) 22642022-22691830 processed_transcript
ENSG00000233451 (RP11-301N24.3)
 ENST00000422675 (RP11-301N24.3-001) 22361172-22413067 sense_overlapping
ENSG00000279819 (RP11-142L16.2)
 ENST00000624564 (RP11-142L16.2-001) 22693953-22694639 TEC
CIL_0002CY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037708-ENSMUSG00000026737 CGP 10090 2:18699023-18998126
GeneTranscriptPositionBiotype
ENSMUSG00000026737 (Pip4k2a)
phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 		ENSMUST00000006912 (Pip4k2a-001) 18842255-18998126 protein_coding
ENSMUST00000148583 (Pip4k2a-003) 18844371-18866120 protein_coding
ENSMUST00000152981 (Pip4k2a-002) 18847497-18906274 protein_coding
ENSMUSG00000037708 (BC061194)
cDNA sequence BC061194 		ENSMUST00000095132 (BC061194-001) 18699023-18750413 protein_coding
ENSMUST00000173763 (BC061194-003) 18699084-18732034 protein_coding
ENSMUSG00000081139 (Gm13333)
predicted gene 13333 		ENSMUST00000119424 (Gm13333-001) 18758984-18759764 processed_pseudogene
ENSMUSG00000087182 (Gm13334)
predicted gene 13334 		ENSMUST00000137796 (Gm13334-001) 18694032-18698884 protein_coding
ENSMUST00000138017 (Gm13334-002) 18694052-18699037 protein_coding
ENSMUSG00000092353 (Gm20539)
predicted gene 20539 		ENSMUST00000174811 (Gm20539-001) 18742715-18760862 processed_transcript
ENSMUSG00000097638 (Carlr)
cardiac and apoptosis-related long non-coding RNA 		ENSMUST00000181515 (Carlr-001) 18799245-18801818 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CY_0001ENSG00000077327ENST00000313311ENST00000376603ENST00000376624ENST00000435326ENST00000456231ENST00000487973ENST00000488555ENST00000490361ENST00000538630ENSG00000150867ENST00000323883ENST00000376573ENST00000422321ENST00000432610ENST00000474335ENST00000545335ENST00000604912ENST00000605011ENSG00000233451ENST00000422675ENSG00000279819ENST00000624564CIL_0002CY_0002ENSMUSG00000026737ENSMUST00000006912ENSMUST00000148583ENSMUST00000152981ENSMUSG00000037708ENSMUST00000095132ENSMUST00000173763ENSMUSG00000081139ENSMUST00000119424ENSMUSG00000087182ENSMUST00000137796ENSMUST00000138017ENSMUSG00000092353ENSMUST00000174811ENSMUSG00000097638ENSMUST00000181515
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CY_0001ENSG00000077327ENST00000313311ENST00000376624ENST00000435326ENST00000456231ENST00000487973ENST00000488555ENST00000538630ENSG00000150867ENST00000323883ENST00000376573ENST00000545335ENST00000604912ENST00000605011ENSG00000233451ENST00000422675ENSG00000279819ENST00000624564CIL_0002CY_0002ENSMUSG00000026737ENSMUST00000006912ENSMUST00000152981ENSMUSG00000037708ENSMUST00000095132ENSMUST00000173763ENSMUSG00000081139ENSMUST00000119424ENSMUSG00000087182ENSMUST00000137796ENSMUST00000138017ENSMUSG00000092353ENSMUST00000174811ENSMUSG00000097638ENSMUST00000181515
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077327 ENST00000313311 N/A N/A N/A N/A 0.027±0.01 N/A N/A 0.094±0.00 N/A N/A N/A 0.269±0.26 0.026±0.01 39.505±0.00
ENST00000376603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376624 N/A N/A N/A 1.190±0.00 N/A N/A N/A N/A N/A 5.727±0.00 N/A 3.279±0.00 0.015±0.00 19.075±0.00
ENST00000435326 N/A 0.278±0.00 N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A
ENST00000456231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 63.485±0.00
ENST00000487973 N/A 0.159±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488555 0.089±0.00 N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538630 N/A 0.021±0.00 N/A 0.837±0.13 0.021±0.00 N/A N/A N/A N/A 0.916±0.00 N/A 0.012±0.00 N/A N/A
ENSG00000150867 ENST00000323883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.790±0.00 3.459±0.00 2.123±0.00
ENST00000376573 13.281±0.00 26.112±0.00 3.279±0.00 60.629±43.83 4.071±0.89 12.604±0.00 2.728±1.67 4.580±2.76 4.412±0.89 9.543±4.91 2.285±0.00 4.764±2.02 6.728±2.19 6.811±5.23
ENST00000422321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.694±0.00 N/A 6.382±0.00
ENST00000604912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.542±0.00 11.543±0.00 6.241±0.00
ENST00000605011 2.333±0.00 3.229±0.00 0.317±0.00 0.770±0.55 1.871±0.00 1.164±0.00 0.818±0.00 1.717±0.00 0.668±0.31 1.615±0.00 0.940±0.00 0.566±0.11 0.091±0.00 0.757±0.66
ENSG00000233451 ENST00000422675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A 0.071±0.04
ENSG00000279819 ENST00000624564 0.068±0.00 0.131±0.00 0.701±0.00 0.414±0.33 0.553±0.00 1.132±0.00 0.098±0.00 N/A 1.332±0.00 4.662±0.00 N/A 0.329±0.28 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026737 ENSMUST00000006912 6.990±3.22 5.541±0.00 7.814±0.03 6.833±1.23 5.283±2.79 2.463±0.28 1.672±0.30 1.402±0.77 9.003±6.84 5.168±2.06 1.045±0.38 7.523±1.80 5.475±1.32 0.451±0.22
ENSMUST00000148583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152981 N/A N/A N/A 11.543±0.00 N/A N/A N/A N/A N/A N/A N/A 9.700±0.00 N/A 1.288±0.00
ENSMUSG00000037708 ENSMUST00000095132 0.048±0.01 0.126±0.00 N/A 0.257±0.20 0.089±0.06 0.066±0.03 0.033±0.00 0.069±0.05 0.015±0.01 0.095±0.01 0.092±0.02 0.113±0.05 0.060±0.08 19.138±9.66
ENSMUST00000173763 N/A 0.654±0.01 N/A N/A 0.196±0.02 0.201±0.02 0.116±0.00 0.078±0.00 N/A N/A 0.247±0.05 0.404±0.14 0.079±0.00 46.070±8.74
ENSMUSG00000081139 ENSMUST00000119424 0.230±0.16 0.520±0.25 0.128±0.03 0.061±0.03 0.226±0.10 0.610±0.46 0.190±0.09 0.158±0.07 0.027±0.01 0.396±0.25 0.057±0.00 0.687±0.38 0.045±0.02 0.127±0.08
ENSMUSG00000087182 ENSMUST00000137796 0.185±0.03 0.131±0.00 N/A N/A 0.097±0.02 0.094±0.00 N/A 0.058±0.00 0.148±0.00 0.189±0.00 0.213±0.07 0.340±0.14 0.344±0.23 N/A
ENSMUST00000138017 0.172±0.00 0.384±0.07 N/A N/A N/A 0.237±0.09 0.101±0.00 0.077±0.02 0.080±0.06 0.249±0.07 0.295±0.18 0.279±0.09 0.167±0.00 N/A
ENSMUSG00000092353 ENSMUST00000174811 0.212±0.08 0.352±0.11 N/A 0.187±0.00 0.102±0.03 0.292±0.14 0.157±0.03 0.085±0.05 0.025±0.01 0.258±0.06 0.073±0.03 0.341±0.17 0.078±0.00 N/A
ENSMUSG00000097638 ENSMUST00000181515 0.027±0.01 N/A N/A 0.317±0.14 0.018±0.00 N/A N/A N/A 0.005±0.00 N/A N/A 0.037±0.01 N/A 6.079±2.56

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