C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm associated antigen 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538630 SPAG6-202 ENSG00000077327 9606 + 10:22360822-22417609 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastLungOvaryENST00000538630
Transcript ID Adrenal Brain Breast Lung Ovary
ENST00000538630 0.021±0.00 0.837±0.13 0.021±0.00 0.916±0.00 0.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000783 CIL_000783_0002 CGP 10:22321211-22454224
CIL_0002CY CIL_0002CY_0001 CGP 10:22345445-22714555

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005874 IEA microtubule
GO:0005930 TAS axoneme
GO:0007286 TAS spermatid development
GO:0015630 IDA microtubule cytoskeleton
GO:0030030 IEA cell projection organization
GO:0031514 IEA motile cilium
GO:0043248 IEA proteasome assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023468 Spag6-001 protein_coding Mus_musculus 0 1616
ENSMUST00000095132 BC061194-001 protein_coding Mus_musculus 0 1574
ENSMUST00000154624 Spag6-003 retained_intron Mus_musculus 0 1378
ENSMUST00000173763 BC061194-003 protein_coding Mus_musculus 0 538
ENSMUST00000147539 Spag6-005 processed_transcript Mus_musculus 0 298
ENSMUST00000151132 Spag6-006 processed_transcript Mus_musculus 0 259

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