C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002DN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087486-ENSDARG00000090044 CGP 7955 5:72649226-72762606
GeneTranscriptPositionBiotype
ENSDARG00000051971 (arl6ip4)
ADP-ribosylation-like factor 6 interacting protein 4 		ENSDART00000053906 (arl6ip4-201) 72674720-72776127 protein_coding
ENSDART00000110542 (arl6ip4-202) 72765518-72776127 protein_coding
ENSDART00000149952 (arl6ip4-002) 72762956-72776127 processed_transcript
ENSDART00000150098 (arl6ip4-001) 72762948-72776134 protein_coding
ENSDARG00000059447 (C5H12orf65 (1 of 2))
chromosome 12 open reading frame 65 		ENSDART00000082624 (C5H12orf65 (1 of 2)-201) 72718577-72721346 protein_coding
ENSDARG00000075395 (dguok)
deoxyguanosine kinase 		ENSDART00000108820 (dguok-001) 72732454-72737639 protein_coding
ENSDART00000149692 (dguok-002) 72732614-72737646 protein_coding
ENSDARG00000076067 (zgc:113389)
zgc:113389 		ENSDART00000073711 (zgc:113389-204) 72609227-72731039 protein_coding
ENSDART00000089972 (zgc:113389-205) 72727670-72731039 protein_coding
ENSDARG00000076551 (setd8b)
SET domain containing (lysine methyltransferase) 8b 		ENSDART00000098758 (setd8b-201) 72724341-72823637 protein_coding
ENSDART00000123165 (setd8b-001) 72815842-72823649 protein_coding
ENSDART00000148779 (setd8b-003) 72816067-72818169 protein_coding
ENSDART00000149242 (setd8b-002) 72815890-72820074 retained_intron
ENSDART00000149419 (setd8b-004) 72815842-72822973 protein_coding
ENSDARG00000087486 (mob1a)
MOB kinase activator 1A 		ENSDART00000073706 (mob1a-001) 72738380-72746353 protein_coding
ENSDART00000109837 (mob1a-201) 72649226-72657615 protein_coding
ENSDART00000127948 (mob1a-202) 72649228-72746228 protein_coding
ENSDART00000154018 (mob1a-002) 72738887-72746071 retained_intron
ENSDARG00000090044 (mthfd2)
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 		ENSDART00000043920 (mthfd2-201) 72657744-72762596 protein_coding
ENSDART00000125952 (mthfd2-001) 72746310-72762606 protein_coding
ENSDARG00000092342 (CT978957.2)
Uncharacterized protein 		ENSDART00000145589 (CT978957.2-201) 72698234-72708931 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002DN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114978-ENSG00000065911 CGP 9606 2:74152528-74217565
GeneTranscriptPositionBiotype
ENSG00000065911 (MTHFD2)
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 		ENST00000394053 (MTHFD2-001) 74198562-74217565 protein_coding
ENST00000409601 (MTHFD2-009) 74198616-74215277 protein_coding
ENST00000409804 (MTHFD2-003) 74198610-74215298 protein_coding
ENST00000462026 (MTHFD2-006) 74206394-74210051 processed_transcript
ENST00000470592 (MTHFD2-007) 74198613-74214741 nonsense_mediated_decay
ENST00000477455 (MTHFD2-004) 74198615-74208721 processed_transcript
ENST00000488086 (MTHFD2-005) 74198629-74206073 processed_transcript
ENST00000489041 (MTHFD2-008) 74198615-74214605 nonsense_mediated_decay
ENSG00000114978 (MOB1A)
MOB kinase activator 1A 		ENST00000396049 (MOB1A-001) 74152528-74178868 protein_coding
ENST00000463975 (MOB1A-002) 74164022-74178868 retained_intron
ENST00000488006 (MOB1A-004) 74172676-74178898 processed_transcript
ENST00000494600 (MOB1A-003) 74178008-74178879 processed_transcript
ENST00000495286 (MOB1A-005) 74159109-74178314 processed_transcript
ENST00000497054 (MOB1A-006) 74159069-74178866 processed_transcript
ENSG00000279070 (RP11-287D1.2)
 ENST00000624835 (RP11-287D1.2-001) 74196704-74198560 TEC
ENSG00000279201 (RP11-287D1.5)
 ENST00000624449 (RP11-287D1.5-001) 74191388-74192245 TEC
ENST00000624749 (RP11-287D1.5-201) 74191390-74191500 TEC

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DN_0001ENSDARG00000051971ENSDART00000053906ENSDART00000110542ENSDART00000149952ENSDART00000150098ENSDARG00000059447ENSDART00000082624ENSDARG00000075395ENSDART00000108820ENSDART00000149692ENSDARG00000076067ENSDART00000073711ENSDART00000089972ENSDARG00000076551ENSDART00000098758ENSDART00000123165ENSDART00000148779ENSDART00000149242ENSDART00000149419ENSDARG00000087486ENSDART00000073706ENSDART00000109837ENSDART00000127948ENSDART00000154018ENSDARG00000090044ENSDART00000043920ENSDART00000125952ENSDARG00000092342ENSDART00000145589CIL_0002DN_0002ENSG00000065911ENST00000394053ENST00000409601ENST00000409804ENST00000462026ENST00000470592ENST00000477455ENST00000488086ENST00000489041ENSG00000114978ENST00000396049ENST00000463975ENST00000488006ENST00000494600ENST00000495286ENST00000497054ENSG00000279070ENST00000624835ENSG00000279201ENST00000624449ENST00000624749
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DN_0001ENSDARG00000051971ENSDART00000053906ENSDART00000110542ENSDART00000149952ENSDART00000150098ENSDARG00000059447ENSDART00000082624ENSDARG00000075395ENSDART00000108820ENSDART00000149692ENSDARG00000076067ENSDART00000073711ENSDART00000089972ENSDARG00000076551ENSDART00000098758ENSDART00000123165ENSDART00000149419ENSDARG00000087486ENSDART00000073706ENSDART00000109837ENSDART00000127948ENSDART00000154018ENSDARG00000090044ENSDART00000043920ENSDART00000125952ENSDARG00000092342ENSDART00000145589CIL_0002DN_0002ENSG00000065911ENST00000394053ENST00000409601ENST00000409804ENST00000470592ENSG00000114978ENST00000396049ENST00000463975ENSG00000279070ENST00000624835ENSG00000279201ENST00000624449
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000051971 ENSDART00000053906 N/A N/A N/A 2.263±1.49 N/A N/A 1.644±0.10 1.516±0.00 0.263±0.00 N/A 1.114±0.00 N/A N/A N/A
ENSDART00000110542 N/A N/A N/A 2.256±0.00 N/A N/A 2.538±0.31 8.436±0.55 N/A N/A N/A N/A N/A N/A
ENSDART00000149952 N/A N/A N/A 1.645±0.32 N/A N/A N/A 4.152±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000150098 N/A N/A N/A 4.264±0.00 N/A N/A 1.747±0.00 3.450±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000059447 ENSDART00000082624 N/A N/A N/A 3.223±3.00 N/A N/A 2.047±0.00 4.480±0.00 0.121±0.00 N/A 0.413±0.00 N/A N/A N/A
ENSDARG00000075395 ENSDART00000108820 N/A N/A N/A 0.678±0.22 N/A N/A 0.239±0.09 4.762±2.15 N/A N/A 0.170±0.00 N/A N/A N/A
ENSDART00000149692 N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A
ENSDARG00000076067 ENSDART00000073711 N/A N/A N/A 0.275±0.09 N/A N/A N/A 0.114±0.02 0.026±0.00 N/A N/A N/A N/A N/A
ENSDART00000089972 N/A N/A N/A 0.156±0.00 N/A N/A 0.081±0.05 N/A N/A N/A 0.044±0.00 N/A N/A N/A
ENSDARG00000076551 ENSDART00000098758 N/A N/A N/A 0.624±0.20 N/A N/A 0.389±0.00 6.786±1.52 0.544±0.00 N/A 0.103±0.00 N/A N/A N/A
ENSDART00000123165 N/A N/A N/A 0.826±0.03 N/A N/A 1.679±1.20 11.892±1.33 0.268±0.00 N/A N/A N/A N/A N/A
ENSDART00000148779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149419 N/A N/A N/A N/A N/A N/A 0.221±0.00 N/A N/A N/A 0.062±0.00 N/A N/A N/A
ENSDARG00000087486 ENSDART00000073706 N/A N/A N/A 1.310±0.22 N/A N/A 9.450±6.06 14.883±9.38 N/A N/A N/A N/A N/A N/A
ENSDART00000109837 N/A N/A N/A 0.767±0.05 N/A N/A 8.683±3.60 11.682±7.33 0.136±0.00 N/A 1.168±0.00 N/A N/A N/A
ENSDART00000127948 N/A N/A N/A 1.240±0.01 N/A N/A 10.571±8.42 26.677±18.69 0.061±0.00 N/A 1.032±0.00 N/A N/A N/A
ENSDART00000154018 N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A N/A N/A
ENSDARG00000090044 ENSDART00000043920 N/A N/A N/A 1.591±1.00 N/A N/A 1.905±0.87 N/A N/A N/A 0.828±0.00 N/A N/A N/A
ENSDART00000125952 N/A N/A N/A 1.218±0.40 N/A N/A 1.955±0.23 0.882±0.00 0.083±0.00 N/A 0.398±0.00 N/A N/A N/A
ENSDARG00000092342 ENSDART00000145589 N/A N/A N/A 0.259±0.13 N/A N/A 0.142±0.06 0.190±0.00 N/A N/A 0.031±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065911 ENST00000394053 N/A N/A N/A N/A 3.280±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409601 N/A N/A N/A N/A N/A 13.645±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 69.838±0.00 N/A N/A
ENST00000462026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470592 N/A N/A N/A N/A 9.373±0.00 19.059±0.00 N/A N/A N/A N/A N/A 14.530±0.00 N/A N/A
ENST00000477455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000114978 ENST00000396049 24.659±0.00 16.089±0.00 6.931±0.00 2.829±0.62 15.184±1.55 11.722±4.33 7.332±3.63 13.179±9.44 8.936±3.50 16.406±0.35 2.946±2.07 18.442±1.80 10.141±2.48 14.497±5.77
ENST00000463975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.452±0.00 N/A N/A N/A
ENST00000488006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279070 ENST00000624835 0.034±0.00 0.111±0.00 N/A 0.078±0.00 0.020±0.00 0.044±0.00 0.019±0.00 0.069±0.00 0.048±0.00 0.037±0.01 0.037±0.00 0.006±0.00 0.012±0.00 1.798±0.00
ENSG00000279201 ENST00000624449 0.031±0.00 0.271±0.00 N/A 0.065±0.00 N/A N/A N/A 0.044±0.00 N/A N/A 0.145±0.00 0.111±0.06 N/A 0.056±0.00
ENST00000624749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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