C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002FW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185483-ENSG00000177414 CGP 9606 1:63774022-64267368
GeneTranscriptPositionBiotype
ENSG00000177414 (UBE2U)
ubiquitin-conjugating enzyme E2U (putative) 		ENST00000371076 (UBE2U-001) 64203807-64244344 protein_coding
ENST00000371077 (UBE2U-002) 64203627-64260694 protein_coding
ENST00000464349 (UBE2U-003) 64215453-64244340 processed_transcript
ENST00000608020 (UBE2U-005) 64214815-64267368 protein_coding
ENST00000608956 (UBE2U-004) 64220864-64267249 protein_coding
ENST00000611228 (UBE2U-006) 64203627-64267368 protein_coding
ENSG00000177452 (RP4-597J3.1)
 ENST00000418154 (RP4-597J3.1-001) 63788721-63789304 processed_pseudogene
ENSG00000185483 (ROR1)
receptor tyrosine kinase-like orphan receptor 1 		ENST00000371079 (ROR1-001) 63774043-64181498 protein_coding
ENST00000371080 (ROR1-002) 63774022-64143385 protein_coding
ENST00000482426 (ROR1-003) 63775290-64140364 processed_transcript
ENST00000545203 (ROR1-201) 64009303-64181492 protein_coding
ENSG00000223949 (ROR1-AS1)
ROR1 antisense RNA 1 		ENST00000412349 (ROR1-AS1-002) 64094442-64112205 antisense
ENST00000424995 (ROR1-AS1-001) 64105322-64171297 antisense
ENSG00000228056 (CFL1P3)
cofilin 1 (non-muscle) pseudogene 3 		ENST00000440942 (CFL1P3-001) 63843196-63843685 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0002FW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035305-ENSMUSG00000069733 CGP 10090 4:100095791-100550147
GeneTranscriptPositionBiotype
ENSMUSG00000035305 (Ror1)
receptor tyrosine kinase-like orphan receptor 1 		ENSMUST00000039630 (Ror1-001) 100095791-100444765 protein_coding
ENSMUSG00000069733 (Ube2u)
ubiquitin-conjugating enzyme E2U (putative) 		ENSMUST00000092730 (Ube2u-002) 100478867-100550145 protein_coding
ENSMUST00000133493 (Ube2u-001) 100478849-100550147 protein_coding
ENSMUSG00000080967 (Gm12706)
predicted gene 12706 		ENSMUST00000121588 (Gm12706-001) 100361362-100362059 processed_pseudogene
ENSMUSG00000085871 (Ube2uos)
ubiquitin-conjugating enzyme E2U (putative), opposite strand 		ENSMUST00000142634 (Ube2uos-001) 100523247-100527801 antisense
ENSMUSG00000086385 (Gm12701)
predicted gene 12701 		ENSMUST00000134206 (Gm12701-001) 100119621-100120841 sense_intronic

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FW_0001ENSG00000177414ENST00000371076ENST00000371077ENST00000464349ENST00000608020ENST00000608956ENST00000611228ENSG00000177452ENST00000418154ENSG00000185483ENST00000371079ENST00000371080ENST00000482426ENST00000545203ENSG00000223949ENST00000412349ENST00000424995ENSG00000228056ENST00000440942CIL_0002FW_0002ENSMUSG00000035305ENSMUST00000039630ENSMUSG00000069733ENSMUST00000092730ENSMUST00000133493ENSMUSG00000080967ENSMUST00000121588ENSMUSG00000085871ENSMUST00000142634ENSMUSG00000086385ENSMUST00000134206
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FW_0001ENSG00000177414ENST00000371076ENST00000371077ENST00000464349ENST00000608020ENST00000608956ENSG00000177452ENST00000418154ENSG00000185483ENST00000371079ENST00000371080ENST00000482426ENST00000545203ENSG00000223949ENST00000412349ENST00000424995ENSG00000228056ENST00000440942CIL_0002FW_0002ENSMUSG00000035305ENSMUST00000039630ENSMUSG00000069733ENSMUST00000092730ENSMUST00000133493ENSMUSG00000080967ENSMUST00000121588ENSMUSG00000085871ENSMUST00000142634ENSMUSG00000086385ENSMUST00000134206
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177414 ENST00000371076 N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A 1.971±0.34
ENST00000371077 N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.525±0.00
ENST00000464349 N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A 0.142±0.00 N/A
ENST00000608020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.02 N/A
ENST00000608956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.898±1.64
ENST00000611228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177452 ENST00000418154 0.057±0.00 0.062±0.00 N/A N/A 0.033±0.00 0.090±0.00 N/A 0.399±0.37 0.028±0.00 0.119±0.01 0.081±0.00 0.184±0.00 N/A 0.028±0.00
ENSG00000185483 ENST00000371079 N/A 1.025±0.00 0.060±0.00 0.137±0.00 0.921±0.00 0.637±0.46 1.146±0.00 0.481±0.00 N/A 0.905±0.14 N/A 0.561±0.30 0.508±0.14 0.432±0.00
ENST00000371080 N/A N/A N/A 0.114±0.01 0.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.264±0.00 N/A N/A N/A
ENST00000545203 0.716±0.00 0.197±0.00 N/A N/A N/A 1.132±0.00 1.059±0.00 0.256±0.15 0.089±0.00 0.467±0.00 0.498±0.00 1.209±0.44 0.569±0.20 1.493±0.92
ENSG00000223949 ENST00000412349 0.094±0.00 0.296±0.00 N/A 0.239±0.00 0.299±0.00 N/A 0.106±0.00 0.247±0.00 N/A 0.180±0.00 N/A 0.071±0.00 N/A 0.608±0.00
ENST00000424995 0.283±0.00 0.756±0.00 0.130±0.00 0.654±0.00 0.359±0.00 0.135±0.06 0.265±0.15 0.419±0.00 0.423±0.23 0.224±0.00 0.141±0.07 0.092±0.06 0.084±0.07 0.727±0.00
ENSG00000228056 ENST00000440942 0.033±0.00 0.073±0.00 0.225±0.00 N/A 0.361±0.00 0.383±0.31 0.595±0.56 N/A 0.891±0.00 0.050±0.01 N/A N/A N/A 0.032±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035305 ENSMUST00000039630 1.252±0.86 0.944±0.32 4.064±0.20 0.337±0.22 0.960±0.39 1.799±0.19 1.015±0.13 1.435±0.25 0.258±0.15 1.560±0.19 0.205±0.03 2.273±0.50 0.989±0.34 0.122±0.07
ENSMUSG00000069733 ENSMUST00000092730 0.030±0.00 N/A 0.010±0.00 0.040±0.00 0.083±0.00 0.186±0.00 N/A N/A 0.196±0.00 0.045±0.00 N/A 0.358±0.25 0.058±0.02 44.555±0.00
ENSMUST00000133493 0.087±0.00 N/A 0.043±0.00 0.064±0.01 N/A N/A N/A 1.029±0.16 0.494±0.41 N/A N/A 0.385±0.15 1.249±0.17 19.628±3.72
ENSMUSG00000080967 ENSMUST00000121588 N/A N/A N/A 0.059±0.00 0.293±0.04 0.166±0.00 0.269±0.00 0.162±0.09 0.058±0.04 0.114±0.02 N/A 0.275±0.16 0.027±0.00 N/A
ENSMUSG00000085871 ENSMUST00000142634 N/A N/A N/A 0.016±0.00 N/A 0.236±0.13 0.267±0.16 0.073±0.00 N/A N/A N/A N/A 0.012±0.00 N/A
ENSMUSG00000086385 ENSMUST00000134206 N/A N/A 0.081±0.00 0.059±0.00 0.096±0.00 0.447±0.00 0.095±0.04 0.174±0.00 0.288±0.16 0.167±0.03 N/A 0.035±0.00 N/A N/A

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