C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002IC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075134-ENSDARG00000086445 CGP 7955 20:35542180-35582510
GeneTranscriptPositionBiotype
ENSDARG00000075134 (si:dkey-30j22.12)
si:dkey-30j22.12 		ENSDART00000112866 (si:dkey-30j22.12-001) 35542180-35561276 protein_coding
ENSDART00000153422 (si:dkey-30j22.12-002) 35559782-35561284 retained_intron
ENSDARG00000086445 (si:dkey-30j22.4)
si:dkey-30j22.4 		ENSDART00000122226 (si:dkey-30j22.4-201) 35576374-35582427 protein_coding
ENSDART00000134753 (si:dkey-30j22.4-001) 35576244-35582510 protein_coding
CIL_0002IC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086445-ENSDARG00000091757 CGP 7955 20:35576244-35603043
GeneTranscriptPositionBiotype
ENSDARG00000086445 (si:dkey-30j22.4)
si:dkey-30j22.4 		ENSDART00000122226 (si:dkey-30j22.4-201) 35576374-35582427 protein_coding
ENSDART00000134753 (si:dkey-30j22.4-001) 35576244-35582510 protein_coding
ENSDARG00000091757 (si:dkey-30j22.2)
si:dkey-30j22.2 		ENSDART00000127011 (si:dkey-30j22.2-201) 35593489-35603027 protein_coding
ENSDART00000142444 (si:dkey-30j22.2-001) 35593160-35603043 protein_coding
ENSDARG00000095208 (si:dkey-30j22.3)
si:dkey-30j22.3 		ENSDART00000143992 (si:dkey-30j22.3-001) 35585265-35588440 lincRNA
ENSDART00000152831 (si:dkey-30j22.3-002) 35587033-35587662 retained_intron
CIL_0002IC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000069122-ENSG00000153292 CGP 9606 6:46852512-47042363
GeneTranscriptPositionBiotype
ENSG00000069122 (GPR116)
G protein-coupled receptor 116 		ENST00000265417 (GPR116-001) 46852599-46954943 protein_coding
ENST00000283296 (GPR116-201) 46852512-46921977 protein_coding
ENST00000478711 (GPR116-002) 46886599-46888416 processed_transcript
ENST00000498632 (GPR116-003) 46859468-46863304 processed_transcript
ENSG00000153292 (GPR110)
G protein-coupled receptor 110 		ENST00000283297 (GPR110-201) 47000222-47018499 protein_coding
ENST00000371243 (GPR110-003) 47019886-47042294 protein_coding
ENST00000371253 (GPR110-001) 46997703-47042363 protein_coding
ENST00000419892 (GPR110-008) 47000091-47042257 retained_intron
ENST00000449332 (GPR110-009) 47000111-47029090 processed_transcript
ENST00000471487 (GPR110-005) 47012787-47042350 retained_intron
ENST00000474800 (GPR110-010) 47020780-47042284 processed_transcript
ENST00000475745 (GPR110-011) 47012111-47025992 nonsense_mediated_decay
ENST00000477771 (GPR110-007) 47020054-47042270 processed_transcript
ENST00000477858 (GPR110-004) 47000033-47001972 retained_intron
ENST00000487323 (GPR110-012) 47016692-47025900 nonsense_mediated_decay
ENST00000491283 (GPR110-006) 47020053-47042270 retained_intron
ENST00000493249 (GPR110-013) 47016617-47024298 retained_intron
ENSG00000225730 (RP3-365O12.2)
 ENST00000451135 (RP3-365O12.2-001) 46903471-46909078 antisense
CIL_0002IC_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164393-ENSG00000153294 CGP 9606 6:47656436-47722021
GeneTranscriptPositionBiotype
ENSG00000153294 (GPR115)
G protein-coupled receptor 115 		ENST00000283303 (GPR115-201) 47698553-47722021 protein_coding
ENST00000327753 (GPR115-001) 47698553-47722021 protein_coding
ENST00000371220 (GPR115-002) 47685864-47722021 protein_coding
ENSG00000164393 (GPR111)
G protein-coupled receptor 111 		ENST00000296862 (GPR111-001) 47656487-47682686 protein_coding
ENST00000398742 (GPR111-201) 47673371-47697793 protein_coding
ENST00000467205 (GPR111-002) 47656590-47697797 nonsense_mediated_decay
ENST00000507065 (GPR111-003) 47656436-47683528 protein_coding
ENSG00000252711 (RN7SKP116)
RNA, 7SK small nuclear pseudogene 116 		ENST00000516902 (RN7SKP116-201) 47715283-47715601 misc_RNA
CIL_0002IC_0005 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023918-ENSMUSG00000057899 CGP 10090 17:42656891-42742179
GeneTranscriptPositionBiotype
ENSMUSG00000023918 (Gpr115)
G protein-coupled receptor 115 		ENSMUST00000024711 (Gpr115-003) 42656891-42692284 protein_coding
ENSMUST00000164524 (Gpr115-004) 42672588-42692273 protein_coding
ENSMUST00000167993 (Gpr115-001) 42656894-42692284 protein_coding
ENSMUST00000170723 (Gpr115-002) 42657091-42692262 protein_coding
ENSMUSG00000057899 (Gpr111)
G protein-coupled receptor 111 		ENSMUST00000113614 (Gpr111-001) 42708936-42742179 protein_coding
CIL_0002IC_0006 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041293-ENSMUSG00000056492 CGP 10090 17:43270329-43459557
GeneTranscriptPositionBiotype
ENSMUSG00000041293 (Gpr110)
G protein-coupled receptor 110 		ENSMUST00000047399 (Gpr110-001) 43270329-43324737 protein_coding
ENSMUSG00000056492 (Gpr116)
G protein-coupled receptor 116 		ENSMUST00000113599 (Gpr116-201) 43389466-43459557 protein_coding
ENSMUSG00000064582 (Gm25135)
predicted gene, 25135 		ENSMUST00000082648 (Gm25135-201) 43454255-43454397 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IC_0001ENSDARG00000075134ENSDART00000112866ENSDART00000153422ENSDARG00000086445ENSDART00000122226ENSDART00000134753CIL_0002IC_0002ENSDARG00000086445ENSDART00000122226ENSDART00000134753ENSDARG00000091757ENSDART00000127011ENSDART00000142444ENSDARG00000095208ENSDART00000143992ENSDART00000152831CIL_0002IC_0003ENSG00000069122ENST00000265417ENST00000283296ENST00000478711ENST00000498632ENSG00000153292ENST00000283297ENST00000371243ENST00000371253ENST00000419892ENST00000449332ENST00000471487ENST00000474800ENST00000475745ENST00000477771ENST00000477858ENST00000487323ENST00000491283ENST00000493249ENSG00000225730ENST00000451135CIL_0002IC_0004ENSG00000153294ENST00000283303ENST00000327753ENST00000371220ENSG00000164393ENST00000296862ENST00000398742ENST00000467205ENST00000507065ENSG00000252711ENST00000516902CIL_0002IC_0005ENSMUSG00000023918ENSMUST00000024711ENSMUST00000164524ENSMUST00000167993ENSMUST00000170723ENSMUSG00000057899ENSMUST00000113614CIL_0002IC_0006ENSMUSG00000041293ENSMUST00000047399ENSMUSG00000056492ENSMUST00000113599ENSMUSG00000064582ENSMUST00000082648
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IC_0001ENSDARG00000075134ENSDART00000112866ENSDARG00000086445ENSDART00000122226ENSDART00000134753CIL_0002IC_0002ENSDARG00000086445ENSDART00000122226ENSDART00000134753ENSDARG00000091757ENSDART00000127011ENSDART00000142444ENSDARG00000095208ENSDART00000143992ENSDART00000152831CIL_0002IC_0003ENSG00000069122ENST00000265417ENST00000283296ENSG00000153292ENST00000283297ENST00000371243ENST00000371253ENST00000419892ENST00000449332ENST00000471487ENST00000477771ENST00000487323ENST00000493249ENSG00000225730ENST00000451135CIL_0002IC_0004ENSG00000153294ENST00000283303ENST00000327753ENST00000371220ENSG00000164393ENST00000296862ENST00000398742ENST00000467205ENST00000507065ENSG00000252711ENST00000516902CIL_0002IC_0005ENSMUSG00000023918ENSMUST00000024711ENSMUST00000167993ENSMUST00000170723ENSMUSG00000057899ENSMUST00000113614CIL_0002IC_0006ENSMUSG00000041293ENSMUST00000047399ENSMUSG00000056492ENSMUST00000113599ENSMUSG00000064582ENSMUST00000082648
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075134 ENSDART00000112866 N/A N/A N/A 0.052±0.03 N/A N/A 0.071±0.03 0.106±0.01 N/A N/A N/A N/A N/A N/A
ENSDART00000153422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000086445 ENSDART00000122226 N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000134753 N/A N/A N/A 0.068±0.00 N/A N/A 0.091±0.00 0.084±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000086445 ENSDART00000122226 N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000134753 N/A N/A N/A 0.068±0.00 N/A N/A 0.091±0.00 0.084±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000091757 ENSDART00000127011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.166±0.00 N/A N/A N/A
ENSDART00000142444 N/A N/A N/A 0.164±0.04 N/A N/A 0.953±0.58 1.461±0.29 0.017±0.00 N/A N/A N/A N/A N/A
ENSDARG00000095208 ENSDART00000143992 N/A N/A N/A 0.290±0.14 N/A N/A 0.356±0.25 0.099±0.00 0.032±0.00 N/A 0.164±0.00 N/A N/A N/A
ENSDART00000152831 N/A N/A N/A 0.425±0.29 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000069122 ENST00000265417 9.750±0.00 6.375±0.00 7.309±0.00 0.717±0.17 4.034±1.98 3.404±2.65 4.106±3.26 7.545±7.13 2.144±0.66 16.135±10.07 1.490±0.00 1.113±0.48 3.019±1.16 1.191±0.00
ENST00000283296 34.319±0.00 4.029±0.00 2.746±0.00 1.740±0.28 6.297±2.63 2.464±1.53 8.780±5.75 3.852±3.09 2.071±0.50 15.061±0.00 2.745±1.30 1.122±0.90 7.964±3.26 1.770±1.10
ENST00000478711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153292 ENST00000283297 N/A N/A 2.334±0.00 N/A N/A N/A N/A 4.416±0.00 N/A 1.156±0.00 N/A 0.234±0.22 0.131±0.04 0.244±0.00
ENST00000371243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.260±0.00 N/A N/A
ENST00000371253 N/A N/A N/A N/A N/A N/A N/A 3.508±0.00 0.304±0.00 N/A N/A 0.032±0.01 0.059±0.04 0.111±0.00
ENST00000419892 0.034±0.00 0.063±0.00 0.565±0.00 0.029±0.00 N/A 0.015±0.01 0.022±0.02 N/A 0.075±0.06 0.305±0.00 0.010±0.00 N/A N/A 0.054±0.00
ENST00000449332 0.027±0.00 N/A N/A N/A N/A N/A N/A 2.836±0.00 0.430±0.00 N/A N/A 0.144±0.05 N/A 0.208±0.00
ENST00000471487 N/A 0.106±0.00 N/A 0.048±0.00 0.038±0.03 N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A
ENST00000474800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477771 N/A N/A N/A 0.109±0.00 N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.586±0.00 N/A N/A
ENST00000491283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493249 N/A N/A N/A N/A N/A N/A N/A N/A 1.524±0.00 N/A N/A N/A 0.120±0.00 N/A
ENSG00000225730 ENST00000451135 N/A 0.031±0.00 N/A N/A N/A N/A 0.146±0.00 0.046±0.00 N/A N/A N/A N/A N/A 0.229±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153294 ENST00000283303 N/A N/A N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A 1.314±0.78 1.088±0.08 N/A
ENST00000327753 0.024±0.00 N/A N/A 0.017±0.00 0.100±0.00 N/A 0.093±0.00 0.032±0.00 N/A 0.030±0.00 0.032±0.00 0.301±0.17 0.328±0.05 0.098±0.05
ENST00000371220 N/A N/A N/A N/A N/A 0.067±0.00 0.009±0.00 N/A N/A N/A N/A 0.372±0.00 0.647±0.00 N/A
ENSG00000164393 ENST00000296862 N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A 0.046±0.00 0.065±0.00 N/A N/A N/A
ENST00000398742 N/A 0.005±0.00 N/A 0.019±0.00 0.005±0.00 0.002±0.00 0.005±0.00 0.016±0.00 N/A 0.049±0.01 N/A N/A N/A 0.038±0.01
ENST00000467205 0.014±0.00 N/A N/A N/A N/A N/A N/A 0.051±0.00 0.002±0.00 N/A N/A N/A N/A 0.088±0.00
ENST00000507065 N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252711 ENST00000516902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.214±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023918 ENSMUST00000024711 0.157±0.03 N/A 0.636±0.34 N/A N/A N/A N/A N/A 0.061±0.00 0.327±0.13 N/A 0.201±0.03 0.297±0.02 N/A
ENSMUST00000164524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167993 0.288±0.00 0.050±0.02 0.494±0.00 0.118±0.02 0.138±0.01 N/A 0.111±0.03 0.061±0.00 0.013±0.00 N/A 0.184±0.03 0.050±0.00 0.482±0.20 0.051±0.02
ENSMUST00000170723 0.170±0.01 0.102±0.09 0.245±0.06 0.237±0.00 0.314±0.17 0.064±0.03 0.078±0.03 0.094±0.04 0.026±0.02 0.243±0.17 0.107±0.03 0.223±0.09 0.281±0.17 0.062±0.03
ENSMUSG00000057899 ENSMUST00000113614 0.095±0.03 0.111±0.09 0.082±0.00 0.058±0.02 0.174±0.06 0.050±0.03 0.043±0.02 0.073±0.04 0.033±0.03 0.778±0.38 0.099±0.04 0.115±0.07 0.064±0.07 0.042±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041293 ENSMUST00000047399 0.020±0.01 N/A 0.005±0.00 0.009±0.01 0.060±0.04 0.350±0.07 0.039±0.01 0.546±0.31 2.271±1.81 N/A 0.018±0.01 0.080±0.05 0.052±0.04 0.070±0.05
ENSMUSG00000056492 ENSMUST00000113599 6.061±3.00 6.229±1.84 4.807±2.19 0.358±0.21 3.985±1.60 1.500±0.80 6.994±1.88 5.377±0.74 1.237±0.51 69.364±7.77 9.297±0.53 5.924±1.64 18.880±13.24 0.354±0.13
ENSMUSG00000064582 ENSMUST00000082648 N/A N/A N/A N/A N/A N/A N/A N/A 8.434±0.00 N/A 2.431±0.49 50.313±1.17 47.172±45.40 N/A

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