C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002KV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086716-ENSDARG00000068724 CGP 7955 6:59051323-59150417
GeneTranscriptPositionBiotype
ENSDARG00000068724 (shmt2)
serine hydroxymethyltransferase 2 (mitochondrial) 		ENSDART00000099503 (shmt2-201) 59116225-59148579 protein_coding
ENSDART00000111064 (shmt2-202) 59094231-59150417 protein_coding
ENSDARG00000086716 (NXPH4)
neurexophilin 4 		ENSDART00000131029 (NXPH4-201) 59051323-59082664 protein_coding
CIL_0002KV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182379-ENSG00000182199 CGP 9606 12:57216795-57234935
GeneTranscriptPositionBiotype
ENSG00000182379 (NXPH4)
neurexophilin 4 		ENST00000349394 (NXPH4-001) 57216795-57226449 protein_coding
ENST00000555154 (NXPH4-003) 57219869-57225419 processed_transcript
ENST00000556415 (NXPH4-002) 57216829-57226448 nonsense_mediated_decay
ENSG00000185633 (NDUFA4L2)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2 		ENST00000393825 (NDUFA4L2-201) 57234905-57240692 protein_coding
ENST00000554503 (NDUFA4L2-001) 57234903-57237338 protein_coding
ENST00000554688 (NDUFA4L2-004) 57236189-57237085 retained_intron
ENST00000555173 (NDUFA4L2-003) 57234911-57237100 retained_intron
ENST00000556234 (NDUFA4L2-009) 57237256-57240703 processed_transcript
ENST00000556732 (NDUFA4L2-005) 57235080-57237092 protein_coding
ENST00000557276 (NDUFA4L2-008) 57239546-57240715 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KV_0001ENSDARG00000068724ENSDART00000099503ENSDART00000111064ENSDARG00000086716ENSDART00000131029CIL_0002KV_0002ENSG00000182379ENST00000349394ENST00000555154ENST00000556415ENSG00000185633ENST00000393825ENST00000554503ENST00000554688ENST00000555173ENST00000556234ENST00000556732ENST00000557276
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KV_0001ENSDARG00000068724ENSDART00000099503ENSDART00000111064ENSDARG00000086716ENSDART00000131029CIL_0002KV_0002ENSG00000182379ENST00000349394ENST00000555154ENST00000556415ENSG00000185633ENST00000393825ENST00000554503ENST00000555173ENST00000556732
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000068724 ENSDART00000099503 N/A N/A N/A N/A N/A N/A 0.779±0.00 N/A 2.361±0.00 N/A N/A N/A N/A N/A
ENSDART00000111064 N/A N/A N/A 4.683±1.01 N/A N/A 1.532±1.04 3.900±1.70 3.599±0.00 N/A 3.173±0.00 N/A N/A N/A
ENSDARG00000086716 ENSDART00000131029 N/A N/A N/A N/A N/A N/A 0.095±0.00 0.111±0.00 0.038±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182379 ENST00000349394 0.944±0.00 0.555±0.00 N/A 1.095±0.28 2.392±0.00 0.123±0.00 0.547±0.52 0.736±0.00 0.093±0.00 0.535±0.00 N/A 0.456±0.20 6.473±2.26 2.868±1.79
ENST00000555154 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.295±0.00 0.148±0.00 0.390±0.00 N/A N/A
ENST00000556415 N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185633 ENST00000393825 N/A N/A N/A 1.309±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554503 N/A N/A N/A 8.248±0.00 N/A N/A 1.030±0.00 N/A 0.497±0.00 26.583±0.00 N/A 15.768±0.00 138.440±36.26 7.941±5.32
ENST00000554688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555173 44.340±0.00 36.681±0.00 N/A 13.902±0.00 47.191±0.00 41.400±0.00 10.972±0.00 N/A N/A 23.811±0.00 1.772±0.00 N/A N/A 11.587±6.97
ENST00000556234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556732 22.212±0.00 N/A N/A N/A N/A N/A 10.295±9.39 N/A N/A 9.726±9.00 N/A N/A 56.593±16.87 N/A
ENST00000557276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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