C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002M8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000006432-ENSG00000100731 CGP 9606 14:70722526-71115382
GeneTranscriptPositionBiotype
ENSG00000006432 (MAP3K9)
mitogen-activated protein kinase kinase kinase 9 		ENST00000381250 (MAP3K9-003) 70729936-70809506 protein_coding
ENST00000553414 (MAP3K9-005) 70729666-70783440 protein_coding
ENST00000554024 (MAP3K9-006) 70749553-70752956 retained_intron
ENST00000554146 (MAP3K9-004) 70730135-70783445 protein_coding
ENST00000554752 (MAP3K9-001) 70722526-70809171 protein_coding
ENST00000555993 (MAP3K9-002) 70729651-70809534 protein_coding
ENST00000611979 (MAP3K9-201) 70722526-70765472 protein_coding
ENSG00000100731 (PCNX)
pecanex homolog (Drosophila) 		ENST00000304743 (PCNX-001) 70907405-71115382 protein_coding
ENST00000439984 (PCNX-004) 70907739-71110118 protein_coding
ENST00000553272 (PCNX-010) 70965365-70977290 processed_transcript
ENST00000553428 (PCNX-011) 70965370-70977151 processed_transcript
ENST00000553508 (PCNX-007) 70946882-70969271 retained_intron
ENST00000554292 (PCNX-006) 70907670-70942940 processed_transcript
ENST00000554691 (PCNX-003) 71013031-71110153 protein_coding
ENST00000554707 (PCNX-013) 71026195-71027202 retained_intron
ENST00000554879 (PCNX-002) 70907405-71012838 retained_intron
ENST00000555780 (PCNX-008) 71109020-71110161 protein_coding
ENST00000556272 (PCNX-005) 71092554-71110148 processed_transcript
ENST00000556516 (PCNX-015) 71050658-71060742 processed_transcript
ENST00000556846 (PCNX-012) 70978378-71009868 retained_intron
ENST00000556849 (PCNX-014) 71047960-71073759 protein_coding
ENST00000557428 (PCNX-009) 71078651-71102189 processed_transcript
ENSG00000258431 (RP1-292L20.2)
 ENST00000555068 (RP1-292L20.2-001) 70858844-70859429 processed_pseudogene
ENSG00000258571 (PTTG4P)
pituitary tumor-transforming 4 pseudogene 		ENST00000556391 (PTTG4P-001) 71085482-71085833 processed_pseudogene
ENSG00000258930 (RP5-1163L11.2)
 ENST00000555418 (RP5-1163L11.2-001) 71031686-71031970 transcribed_processed_pseudogene
ENSG00000258966 (GTF3AP2)
general transcription factor IIIA pseudogene 2 		ENST00000557014 (GTF3AP2-001) 71044375-71044640 transcribed_processed_pseudogene
ENSG00000259153 (RP6-65G23.3)
 ENST00000554032 (RP6-65G23.3-002) 70810205-70815391 lincRNA
ENST00000557691 (RP6-65G23.3-001) 70810330-70815403 lincRNA
ENSG00000274818 (RP1-292L20.3)
 ENST00000616634 (RP1-292L20.3-001) 70906657-70907111 lincRNA
ENSG00000275630 (RP6-65G23.5)
 ENST00000622856 (RP6-65G23.5-001) 70822004-70823984 lincRNA
CIL_0002M8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042724-ENSMUSG00000021140 CGP 10090 12:81714950-82000924
GeneTranscriptPositionBiotype
ENSMUSG00000021140 (Pcnx)
pecanex homolog (Drosophila) 		ENSMUST00000021567 (Pcnx-201) 81860030-82000924 protein_coding
ENSMUSG00000042724 (Map3k9)
mitogen-activated protein kinase kinase kinase 9 		ENSMUST00000035987 (Map3k9-201) 81714950-81781170 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M8_0001ENSG00000006432ENST00000381250ENST00000553414ENST00000554024ENST00000554146ENST00000554752ENST00000555993ENST00000611979ENSG00000100731ENST00000304743ENST00000439984ENST00000553272ENST00000553428ENST00000553508ENST00000554292ENST00000554691ENST00000554707ENST00000554879ENST00000555780ENST00000556272ENST00000556516ENST00000556846ENST00000556849ENST00000557428ENSG00000258431ENST00000555068ENSG00000258571ENST00000556391ENSG00000258930ENST00000555418ENSG00000258966ENST00000557014ENSG00000259153ENST00000554032ENST00000557691ENSG00000274818ENST00000616634ENSG00000275630ENST00000622856CIL_0002M8_0002ENSMUSG00000021140ENSMUST00000021567ENSMUSG00000042724ENSMUST00000035987
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M8_0001ENSG00000006432ENST00000381250ENST00000554024ENST00000554752ENST00000555993ENST00000611979ENSG00000100731ENST00000304743ENST00000439984ENST00000554691ENST00000554879ENSG00000258431ENST00000555068ENSG00000258571ENST00000556391ENSG00000258930ENST00000555418ENSG00000258966ENST00000557014ENSG00000259153ENST00000554032ENST00000557691ENSG00000274818ENST00000616634ENSG00000275630ENST00000622856CIL_0002M8_0002ENSMUSG00000021140ENSMUST00000021567ENSMUSG00000042724ENSMUST00000035987
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006432 ENST00000381250 N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A 0.084±0.00 N/A N/A N/A 0.090±0.00 N/A
ENST00000553414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554024 N/A N/A N/A N/A 0.759±0.00 N/A N/A N/A N/A 1.313±0.00 0.863±0.00 1.793±0.00 N/A N/A
ENST00000554146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554752 0.012±0.00 0.299±0.00 0.353±0.00 3.315±0.65 0.129±0.02 0.181±0.00 0.173±0.14 0.195±0.00 0.281±0.00 0.362±0.04 0.171±0.01 0.509±0.35 0.064±0.03 1.383±0.47
ENST00000555993 N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A 0.728±0.00 0.418±0.00 N/A 0.133±0.00 N/A
ENST00000611979 N/A N/A N/A N/A N/A N/A N/A 0.913±0.00 0.085±0.04 0.404±0.00 N/A 0.154±0.06 0.183±0.12 0.998±0.34
ENSG00000100731 ENST00000304743 1.968±0.00 N/A 2.142±0.00 3.039±1.20 2.182±0.42 2.753±0.88 3.260±1.37 0.535±0.00 0.440±0.00 2.648±1.95 1.912±0.59 2.482±1.99 0.863±0.46 2.787±1.38
ENST00000439984 4.028±0.00 3.085±0.00 2.105±0.00 1.762±0.15 3.005±0.85 1.529±0.05 2.864±0.43 N/A 2.308±1.37 4.235±1.05 5.720±0.00 1.749±1.02 0.975±0.10 5.958±2.60
ENST00000553272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554691 N/A N/A N/A N/A N/A N/A N/A 2.184±0.00 N/A N/A N/A 0.847±0.00 0.795±0.00 3.388±0.00
ENST00000554707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554879 N/A N/A 1.648±0.00 N/A 1.779±0.00 N/A N/A N/A 3.329±0.00 N/A N/A N/A N/A N/A
ENST00000555780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258431 ENST00000555068 N/A N/A N/A N/A N/A N/A 0.214±0.00 N/A N/A 0.121±0.00 N/A N/A N/A N/A
ENSG00000258571 ENST00000556391 N/A 0.162±0.00 2.591±0.00 0.137±0.00 N/A 0.626±0.39 0.441±0.00 N/A N/A 1.663±0.00 1.701±0.00 0.098±0.01 N/A 0.104±0.07
ENSG00000258930 ENST00000555418 N/A 0.071±0.00 N/A N/A N/A N/A 1.463±0.00 N/A 2.861±0.00 N/A 0.061±0.00 N/A N/A N/A
ENSG00000258966 ENST00000557014 N/A 0.063±0.00 N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.04
ENSG00000259153 ENST00000554032 N/A N/A N/A N/A 0.148±0.00 N/A N/A 0.276±0.00 0.137±0.00 0.158±0.00 N/A 0.953±0.66 0.219±0.08 0.203±0.00
ENST00000557691 N/A 0.125±0.00 0.397±0.00 2.961±1.92 0.230±0.07 0.038±0.00 0.114±0.00 0.412±0.00 N/A 0.159±0.00 0.089±0.00 0.420±0.08 0.391±0.21 0.209±0.00
ENSG00000274818 ENST00000616634 1.968±0.00 1.593±0.00 0.413±0.00 0.924±0.24 1.075±0.00 0.213±0.00 1.091±0.84 0.088±0.00 1.093±0.00 1.026±0.35 0.347±0.00 3.280±2.21 0.323±0.16 9.204±5.11
ENSG00000275630 ENST00000622856 0.902±0.00 0.196±0.00 N/A 0.211±0.00 0.523±0.00 0.094±0.00 0.360±0.00 0.102±0.00 0.090±0.00 0.101±0.00 N/A 0.663±0.49 0.232±0.10 0.353±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021140 ENSMUST00000021567 3.092±0.00 9.321±6.45 1.010±0.00 1.274±0.00 7.500±3.89 4.182±1.78 4.383±2.01 3.278±2.04 1.271±1.31 13.944±0.00 1.113±0.07 6.445±3.95 1.396±1.19 5.722±2.85
ENSMUSG00000042724 ENSMUST00000035987 0.158±0.10 0.688±0.18 1.177±0.01 6.697±3.05 0.303±0.01 1.864±0.24 0.073±0.03 0.874±0.37 0.055±0.06 2.080±0.69 0.040±0.02 0.480±0.12 0.654±0.66 1.022±0.35

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