C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pecanex homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021567 Pcnx-201 ENSMUSG00000021140 10090 + 12:81860030-82000924 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021567
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021567 3.092±0.00 9.321±6.45 1.010±0.00 1.274±0.00 7.500±3.89 4.182±1.78 4.383±2.01 3.278±2.04 1.271±1.31 13.944±0.00 1.113±0.07 6.445±3.95 1.396±1.19 5.722±2.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M8 CIL_0002M8_0002 CGP 12:81714950-82000924
CIL_0002M7 CIL_0002M7_0002 CGP 12:81860030-82451782

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304743 PCNX-001 protein_coding Homo_sapiens 0 7729
ENST00000355703 PCNXL3-001 protein_coding Homo_sapiens 0 800
ENST00000439247 PCNXL3-003 retained_intron Homo_sapiens 0 800
ENST00000439984 PCNX-004 protein_coding Homo_sapiens 0 4778
ENST00000553272 PCNX-010 processed_transcript Homo_sapiens 0 556
ENST00000553428 PCNX-011 processed_transcript Homo_sapiens 0 195
ENST00000553508 PCNX-007 retained_intron Homo_sapiens 0 569
ENST00000554292 PCNX-006 processed_transcript Homo_sapiens 0 396
ENST00000554691 PCNX-003 protein_coding Homo_sapiens 0 2440
ENST00000554707 PCNX-013 retained_intron Homo_sapiens 2e-16 90
ENST00000554879 PCNX-002 retained_intron Homo_sapiens 0 2741
ENST00000555780 PCNX-008 protein_coding Homo_sapiens 0 278
ENST00000556272 PCNX-005 processed_transcript Homo_sapiens 0 1624
ENST00000556846 PCNX-012 retained_intron Homo_sapiens 0 318

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