C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002N0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000232388-ENSG00000125821 CGP 9606 20:18567347-18763917
GeneTranscriptPositionBiotype
ENSG00000125821 (DTD1)
D-tyrosyl-tRNA deacylase 1 		ENST00000377452 (DTD1-001) 18587893-18763917 protein_coding
ENST00000494921 (DTD1-002) 18587964-18632178 processed_transcript
ENST00000618693 (DTD1-003) 18567453-18744216 protein_coding
ENSG00000221806 (RNU6ATAC34P)
RNA, U6atac small nuclear 34, pseudogene 		ENST00000408879 (RNU6ATAC34P-201) 18611047-18611167 snRNA
ENSG00000232136 (DUXAP7)
double homeobox A pseudogene 7 		ENST00000431038 (DUXAP7-001) 18642782-18643634 processed_pseudogene
ENSG00000232388 (LINC00493)
long intergenic non-protein coding RNA 493 		ENST00000411646 (LINC00493-002) 18567420-18569563 protein_coding
ENST00000435844 (LINC00493-001) 18567347-18569563 protein_coding
ENST00000608034 (LINC00493-003) 18567447-18569155 protein_coding
ENSG00000233993 (RP11-379J5.5)
 ENST00000428285 (RP11-379J5.5-001) 18674395-18698709 antisense
ENSG00000243702 (RN7SL638P)
RNA, 7SL, cytoplasmic 638, pseudogene 		ENST00000494527 (RN7SL638P-201) 18592330-18592619 misc_RNA
CIL_0002N0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074754-ENSMUSG00000027430 CGP 10090 2:144594054-144768758
GeneTranscriptPositionBiotype
ENSMUSG00000027430 (Dtd1)
D-tyrosyl-tRNA deacylase 1 		ENSMUST00000028917 (Dtd1-001) 144599897-144768758 protein_coding
ENSMUST00000125683 (Dtd1-004) 144731814-144768494 processed_transcript
ENSMUST00000137406 (Dtd1-005) 144678098-144747007 processed_transcript
ENSMUST00000145602 (Dtd1-002) 144738414-144768275 processed_transcript
ENSMUST00000145814 (Dtd1-003) 144616618-144768440 processed_transcript
ENSMUSG00000074754 (Gm561)
predicted gene 561 		ENSMUST00000136628 (Gm561-001) 144594054-144595366 protein_coding
ENSMUSG00000084306 (Gm11743)
predicted gene 11743 		ENSMUST00000117385 (Gm11743-001) 144756329-144758582 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002N0_0001ENSG00000125821ENST00000377452ENST00000494921ENST00000618693ENSG00000221806ENST00000408879ENSG00000232136ENST00000431038ENSG00000232388ENST00000411646ENST00000435844ENST00000608034ENSG00000233993ENST00000428285ENSG00000243702ENST00000494527CIL_0002N0_0002ENSMUSG00000027430ENSMUST00000028917ENSMUST00000125683ENSMUST00000137406ENSMUST00000145602ENSMUST00000145814ENSMUSG00000074754ENSMUST00000136628ENSMUSG00000084306ENSMUST00000117385
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002N0_0001ENSG00000125821ENST00000377452ENST00000494921ENST00000618693ENSG00000221806ENST00000408879ENSG00000232136ENST00000431038ENSG00000232388ENST00000411646ENST00000435844ENSG00000233993ENST00000428285ENSG00000243702ENST00000494527CIL_0002N0_0002ENSMUSG00000027430ENSMUST00000028917ENSMUST00000145814ENSMUSG00000074754ENSMUST00000136628ENSMUSG00000084306ENSMUST00000117385
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125821 ENST00000377452 14.036±0.00 15.774±0.00 1.473±0.00 14.734±4.68 5.552±1.34 4.374±2.77 3.022±1.89 7.771±7.10 2.395±1.02 5.118±3.58 3.656±1.57 20.481±15.71 19.538±7.08 25.717±8.24
ENST00000494921 N/A N/A 0.699±0.00 N/A 1.289±0.00 0.425±0.00 N/A N/A N/A N/A 0.607±0.00 0.945±0.00 N/A N/A
ENST00000618693 N/A N/A N/A 17.143±0.00 N/A N/A N/A 0.894±0.00 N/A 1.766±0.00 N/A N/A N/A N/A
ENSG00000221806 ENST00000408879 N/A 0.549±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232136 ENST00000431038 0.289±0.00 0.710±0.00 0.247±0.00 0.314±0.00 0.390±0.24 0.179±0.07 0.108±0.00 0.418±0.00 0.045±0.00 0.154±0.00 0.685±0.67 0.091±0.04 N/A 0.092±0.00
ENSG00000232388 ENST00000411646 10.063±0.00 13.410±0.00 N/A N/A 16.262±0.00 6.975±5.41 7.596±5.66 0.858±0.00 6.433±4.76 3.502±0.00 9.950±0.94 24.657±17.58 12.965±2.77 18.225±0.00
ENST00000435844 14.003±0.00 17.221±0.00 N/A 19.232±0.00 15.985±10.46 30.983±0.00 15.931±13.61 19.448±17.91 11.318±8.85 31.639±0.00 25.511±23.52 43.361±7.55 24.396±3.14 17.437±0.00
ENST00000608034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233993 ENST00000428285 N/A 0.045±0.00 N/A 0.010±0.00 N/A N/A 0.055±0.00 N/A N/A N/A N/A 0.172±0.15 N/A 0.261±0.06
ENSG00000243702 ENST00000494527 0.110±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027430 ENSMUST00000028917 10.086±2.06 4.649±0.34 11.776±0.11 17.750±0.91 6.694±1.71 3.557±0.67 5.677±0.54 12.851±1.48 8.084±3.01 7.695±0.37 4.635±0.96 8.951±1.59 3.287±2.04 5.361±2.02
ENSMUST00000125683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145814 N/A N/A N/A 37.361±0.00 N/A 1.486±0.64 N/A N/A N/A N/A 1.355±0.00 6.328±4.75 5.829±5.02 1.767±0.00
ENSMUSG00000074754 ENSMUST00000136628 5.021±0.54 0.620±0.21 26.211±4.07 23.436±14.10 3.362±2.27 1.650±0.32 15.217±1.57 13.678±2.68 9.511±4.99 3.208±0.53 43.834±2.69 7.884±10.09 18.890±12.06 2.005±0.94
ENSMUSG00000084306 ENSMUST00000117385 0.038±0.01 N/A 0.021±0.02 0.068±0.03 N/A N/A N/A 0.051±0.02 0.028±0.03 N/A 0.025±0.00 0.074±0.07 0.015±0.01 0.020±0.01

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