C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 493
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000232388 LINC00493 9606 + 20:18567347-18569563 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000411646 LINC00493-002 18567420-18569563 protein_coding
  ENST00000435844 LINC00493-001 18567347-18569563 protein_coding
  ENST00000608034 LINC00493-003 18567447-18569155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000411646ENST00000435844
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000411646 10.063±0.00 13.410±0.00 N/A 16.262±0.00 6.975±5.41 7.596±5.66 0.858±0.00 6.433±4.76 3.502±0.00 9.950±0.94 24.657±17.58 12.965±2.77 18.225±0.00
ENST00000435844 14.003±0.00 17.221±0.00 19.232±0.00 15.985±10.46 30.983±0.00 15.931±13.61 19.448±17.91 11.318±8.85 31.639±0.00 25.511±23.52 43.361±7.55 24.396±3.14 17.437±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YA CIL_0000YA_0001 CGP 20:18507493-18569563
CIL_0002N0 CIL_0002N0_0001 CGP 20:18567347-18763917

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000074754 Gm561 predicted gene 561 protein_coding Mus_musculus

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