C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002OZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058699-ENSDARG00000071196 CGP 7955 6:8930974-9088387
GeneTranscriptPositionBiotype
ENSDARG00000058699 (tmeff2b)
transmembrane protein with EGF-like and two follistatin-like domains 2b 		ENSDART00000042115 (tmeff2b-201) 9007463-9036310 protein_coding
ENSDART00000129959 (tmeff2b-202) 8931343-8982575 protein_coding
ENSDART00000151443 (tmeff2b-001) 8930974-9036858 protein_coding
ENSDARG00000071196 (sdprb)
serum deprivation response b 		ENSDART00000143956 (sdprb-001) 9059433-9088387 protein_coding
CIL_0002OZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026109-ENSMUSG00000045954 CGP 10090 1:50900647-51302960
GeneTranscriptPositionBiotype
ENSMUSG00000026109 (Tmeff2)
transmembrane protein with EGF-like and two follistatin-like domains 2 		ENSMUST00000081851 (Tmeff2-001) 50927519-51187270 protein_coding
ENSMUST00000114565 (Tmeff2-002) 50909962-50979920 protein_coding
ENSMUST00000139157 (Tmeff2-003) 50900647-50915430 processed_transcript
ENSMUST00000186103 (Tmeff2-004) 50900647-50913925 processed_transcript
ENSMUSG00000045954 (Sdpr)
serum deprivation response 		ENSMUST00000051572 (Sdpr-001) 51289126-51302960 protein_coding
ENSMUSG00000092906 (Gm25736)
predicted gene, 25736 		ENSMUST00000175165 (Gm25736-201) 51015313-51015413 miRNA
ENSMUSG00000099625 (RP24-555D5.1)
predicted gene 29325 		ENSMUST00000190705 (RP24-555D5.1-001) 51195221-51197748 lincRNA
ENSMUSG00000099924 (RP24-330P10.2)
predicted gene 28320 		ENSMUST00000187777 (RP24-330P10.2-001) 51148309-51150581 sense_intronic
ENSMUSG00000100671 (RP23-122O4.1)
predicted gene 28322 		ENSMUST00000185627 (RP23-122O4.1-001) 50904444-50905918 lincRNA
ENSMUSG00000101242 (RP24-330P10.1)
predicted gene 28319 		ENSMUST00000189560 (RP24-330P10.1-001) 51138281-51141222 antisense
ENSMUSG00000101799 (RP24-555D5.2)
RIKEN cDNA 9330175M20 gene 		ENSMUST00000189867 (RP24-555D5.2-001) 51218386-51333779 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OZ_0001ENSDARG00000058699ENSDART00000042115ENSDART00000129959ENSDART00000151443ENSDARG00000071196ENSDART00000143956CIL_0002OZ_0002ENSMUSG00000026109ENSMUST00000081851ENSMUST00000114565ENSMUST00000139157ENSMUST00000186103ENSMUSG00000045954ENSMUST00000051572ENSMUSG00000092906ENSMUST00000175165ENSMUSG00000099625ENSMUST00000190705ENSMUSG00000099924ENSMUST00000187777ENSMUSG00000100671ENSMUST00000185627ENSMUSG00000101242ENSMUST00000189560ENSMUSG00000101799ENSMUST00000189867
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OZ_0001ENSDARG00000058699ENSDART00000042115ENSDART00000151443ENSDARG00000071196ENSDART00000143956CIL_0002OZ_0002ENSMUSG00000026109ENSMUST00000081851ENSMUST00000114565ENSMUSG00000045954ENSMUST00000051572ENSMUSG00000092906ENSMUST00000175165ENSMUSG00000099625ENSMUST00000190705ENSMUSG00000099924ENSMUST00000187777ENSMUSG00000100671ENSMUST00000185627ENSMUSG00000101242ENSMUST00000189560ENSMUSG00000101799ENSMUST00000189867
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058699 ENSDART00000042115 N/A N/A N/A 11.849±0.00 N/A N/A 0.178±0.08 0.140±0.00 0.102±0.00 N/A N/A N/A N/A N/A
ENSDART00000129959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151443 N/A N/A N/A 1.638±1.32 N/A N/A 0.094±0.04 0.062±0.00 0.105±0.00 N/A N/A N/A N/A N/A
ENSDARG00000071196 ENSDART00000143956 N/A N/A N/A 4.109±0.71 N/A N/A 137.069±65.89 30.152±10.53 1.341±0.00 N/A 23.991±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026109 ENSMUST00000081851 3.617±0.17 5.982±3.96 2.154±0.13 13.880±5.01 10.887±2.89 0.312±0.17 0.292±0.12 0.286±0.08 0.180±0.11 5.772±1.87 0.265±0.06 3.008±2.26 0.114±0.11 0.092±0.04
ENSMUST00000114565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.134±0.05
ENSMUST00000139157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000045954 ENSMUST00000051572 113.342±48.34 22.852±2.74 47.729±3.33 1.743±0.62 54.580±9.54 22.163±2.09 39.255±4.43 13.240±0.92 7.523±2.84 213.866±14.50 12.916±0.90 31.515±7.02 6.998±4.97 1.077±0.32
ENSMUSG00000092906 ENSMUST00000175165 1867.535±52.88 N/A N/A 41.204±18.35 3060.790±0.00 N/A N/A 3390.000±0.00 1670.089±1644.69 3101.770±0.00 N/A N/A N/A N/A
ENSMUSG00000099625 ENSMUST00000190705 N/A N/A N/A 0.035±0.02 0.041±0.02 N/A N/A N/A 0.003±0.00 N/A 0.008±0.00 0.006±0.00 0.005±0.00 0.002±0.00
ENSMUSG00000099924 ENSMUST00000187777 0.054±0.03 0.065±0.00 0.012±0.01 0.198±0.09 0.044±0.02 N/A N/A N/A 0.007±0.00 0.045±0.01 N/A 0.030±0.02 0.002±0.00 N/A
ENSMUSG00000100671 ENSMUST00000185627 N/A N/A 0.006±0.00 0.034±0.00 N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A 0.028±0.00
ENSMUSG00000101242 ENSMUST00000189560 1.122±0.00 N/A N/A 0.465±0.12 N/A N/A 1.558±0.00 N/A N/A 0.970±0.00 N/A N/A N/A N/A
ENSMUSG00000101799 ENSMUST00000189867 0.055±0.02 N/A 0.060±0.01 0.044±0.00 0.054±0.02 N/A 0.028±0.02 N/A 0.005±0.00 0.045±0.02 N/A 0.010±0.00 0.006±0.00 0.062±0.03

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