C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serum deprivation response
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051572 Sdpr-001 ENSMUSG00000045954 10090 + 1:51289126-51302960 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051572
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051572 113.342±48.34 22.852±2.74 47.729±3.33 1.743±0.62 54.580±9.54 22.163±2.09 39.255±4.43 13.240±0.92 7.523±2.84 213.866±14.50 12.916±0.90 31.515±7.02 6.998±4.97 1.077±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OZ CIL_0002OZ_0002 CGP 1:50900647-51302960
CIL_00022K CIL_00022K_0002 CGP 1:51289126-51478425

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001786 ISS phosphatidylserine binding
GO:0005515 IEA protein binding
GO:0005737 ISO cytoplasm
GO:0005829 ISS cytosol
GO:0016020 IEA membrane
GO:0045944 ISO positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304141 SDPR-001 protein_coding Homo_sapiens 0 1131

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