C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002TU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076416-ENSDARG00000087805 CGP 7955 6:30119684-30155283
GeneTranscriptPositionBiotype
ENSDARG00000076416 (SHROOM2 (2 of 2))
shroom family member 2 		ENSDART00000108943 (SHROOM2 (2 of 2)-201) 30119684-30143220 protein_coding
ENSDARG00000087805 (CABZ01007930.1)
Uncharacterized protein 		ENSDART00000121492 (CABZ01007930.1-201) 30154558-30155283 protein_coding
CIL_0002TU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146950-ENSG00000234469 CGP 9606 X:9786456-9968352
GeneTranscriptPositionBiotype
ENSG00000146950 (SHROOM2)
shroom family member 2 		ENST00000380913 (SHROOM2-001) 9786456-9949443 protein_coding
ENST00000418909 (SHROOM2-201) 9912434-9949441 protein_coding
ENST00000452575 (SHROOM2-002) 9912683-9946708 protein_coding
ENST00000493668 (SHROOM2-003) 9898145-9937146 processed_transcript
ENSG00000215319 (RP11-98L4.1)
 ENST00000400019 (RP11-98L4.1-001) 9818239-9819469 processed_pseudogene
ENSG00000230326 (HMGN1P33)
high mobility group nucleosome binding domain 1 pseudogene 33 		ENST00000432945 (HMGN1P33-001) 9865093-9865543 processed_pseudogene
ENSG00000234469 (AC002365.5)
uncharacterized protein LOC100288814 		ENST00000445307 (AC002365.5-001) 9967358-9968352 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TU_0001ENSDARG00000076416ENSDART00000108943ENSDARG00000087805ENSDART00000121492CIL_0002TU_0002ENSG00000146950ENST00000380913ENST00000418909ENST00000452575ENST00000493668ENSG00000215319ENST00000400019ENSG00000230326ENST00000432945ENSG00000234469ENST00000445307
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TU_0001ENSDARG00000076416ENSDART00000108943ENSDARG00000087805ENSDART00000121492CIL_0002TU_0002ENSG00000146950ENST00000380913ENST00000418909ENSG00000215319ENST00000400019ENSG00000230326ENST00000432945ENSG00000234469ENST00000445307
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000076416 ENSDART00000108943 N/A N/A N/A 1.826±0.42 N/A N/A 0.594±0.45 1.764±0.00 0.474±0.00 N/A 0.170±0.00 N/A N/A N/A
ENSDARG00000087805 ENSDART00000121492 N/A N/A N/A N/A N/A N/A N/A 2.062±0.00 0.162±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146950 ENST00000380913 N/A 0.214±0.00 0.346±0.00 N/A 0.128±0.08 0.225±0.02 0.087±0.05 1.284±0.27 0.498±0.38 0.305±0.22 0.048±0.00 1.866±1.50 2.149±0.13 3.231±2.60
ENST00000418909 N/A N/A N/A 0.536±0.00 N/A N/A N/A 1.414±0.00 0.150±0.00 N/A N/A N/A N/A 5.504±0.00
ENST00000452575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215319 ENST00000400019 N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A 0.243±0.00 N/A 0.008±0.00 N/A N/A
ENSG00000230326 ENST00000432945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00
ENSG00000234469 ENST00000445307 0.014±0.00 0.014±0.00 N/A 0.087±0.00 0.027±0.00 0.063±0.00 N/A 0.040±0.00 N/A 0.439±0.00 N/A 0.073±0.00 N/A 0.598±0.05

Loading